| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3445 |
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| Symbol | |
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| ID | 6160278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3847943 |
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| End bp | 3849184 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666220 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001792468 |
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| Protein GI | 171060119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0109315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC TGCCGTTCAG CAACACCTCG CCCACTCCGC CCTCCGACGC CGTCCTGGCG
GCCCTGCAAG TGAGCCGGCG GGGCTGCGAG GAGTTGCTGC CCGAAGCCGA CTGGCTCAAG
AAGCTCGTGC GCTCGGAGGC CAGCGGCACG CCGCTGCGCA TCAAGCTCGG CCTCGACCCG
ACCGCGCCCG ACATCCACCT CGGCCACACC GTGGTGCTCA ACAAGCTGCG CCAGCTGCAG
GACCTGGGCC ACACGGTGAT CTTCCTGATC GGCGACTTCA CGTCGATGAT CGGCGACCCG
TCCGGGCGCA ACACCACCCG CCCGCCGCTG ACGGCCGAGC AGATCAAGCT CAACGCCGAA
ACCTACTACC GCCAGGCCAG CCTGGTGCTC GATCCGGCGC GCACCGAGAT CCGCTACAAC
AGCGAGTGGT GCGACCCGCT GGGCGCGCGC GGCATGATCG CGCTGGCCTC GCGCTACACC
GTGGCGCGCA TGATGGAGCG CAACGATTTC CACGAGCGCT TCCATGCCGG CACCTCGATC
GCGGTGCACG AGTTCCTGTA CCCGCTGATG CAGGGTTACG ACTCGGTGGC GCTGAAAAGC
GACCTCGAGC TCGGCGGCAC CGACCAGAAG TTCAACCTGC TGATGGGCCG CCACCTGCAG
GCCGAATACG GCCAGGAGCC GCAGTGCATC CTGACCATGC CGCTGCTGGT CGGGCTCGAC
GGCGTCGAGA AGATGTCCAA GAGCAAGGGC AACTACATCG GCATCAGCGA GGCGGCCAAC
GACATGTTCG CCAAGCTGCT GTCGATCAGC GACACGCTGA TGTGGTCGTA CTTCACCCTG
CTGAGCTTTC GCAGCGAAGA GGCGATCGCT GCGCTCAAGG CCGAGGTCGA CGCCGGCCGC
AACCCCAAGG ACGCCAAGGT GCTGCTGGCC AAGGAGATCA CCGCGCGCTT CCACGGCGCG
GCGGCGGCGG ACGCGGCCGA GCAGGATTTC CAGAATCGCG CCAAGGGCGG CATTCCCGAT
GATCTGCCGC AGGTCAGCCT GTCGGGCGCG CCGCTGGGCA TCGGCGCCTT GCTCAAGCAG
GCCAACCTGG TGCCGTCGTC CAGCGAGGCC ATGCGCCTGA TCGAGCAGGG CGGCGTGCGC
ATCGACGGCG GCGTGATCAG CGACAAGGGC CTCAAGCTCG CCGCCGGCCG CTACGTGCTG
CAGGTGGGCA AGCGCAAGTT CGCGCAGGTC GATCTGAGTT GA
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| Protein sequence | MSSLPFSNTS PTPPSDAVLA ALQVSRRGCE ELLPEADWLK KLVRSEASGT PLRIKLGLDP
TAPDIHLGHT VVLNKLRQLQ DLGHTVIFLI GDFTSMIGDP SGRNTTRPPL TAEQIKLNAE
TYYRQASLVL DPARTEIRYN SEWCDPLGAR GMIALASRYT VARMMERNDF HERFHAGTSI
AVHEFLYPLM QGYDSVALKS DLELGGTDQK FNLLMGRHLQ AEYGQEPQCI LTMPLLVGLD
GVEKMSKSKG NYIGISEAAN DMFAKLLSIS DTLMWSYFTL LSFRSEEAIA ALKAEVDAGR
NPKDAKVLLA KEITARFHGA AAADAAEQDF QNRAKGGIPD DLPQVSLSGA PLGIGALLKQ
ANLVPSSSEA MRLIEQGGVR IDGGVISDKG LKLAAGRYVL QVGKRKFAQV DLS
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