| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3426 |
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| Symbol | |
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| ID | 6161879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3808753 |
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| End bp | 3809712 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641666201 |
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| Product | general secretion pathway protein N |
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| Protein accession | YP_001792449 |
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| Protein GI | 171060100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000290078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGAC TCGATGTCTT CACCCGACGC CGCAGCGCCA CGCAGCCGCT GGCCCGGGGC
TCGGCACTCA ACACCGCCGG CCGCGGCTCG CGGCGGACGC GCCAGGCGCT CGACAACGGC
TGGGCGATCG CTGCGGCGGC GAGCCGGCGC TGGGCGCTGT TCGGCGCCCT GTTCGGCGGC
CTGCTGGCGT TGATCGTGTT CGCGCCGGCC AGCTGGCTGG CGCAGGCGGT GAGCACGGCC
ACCGGTGAAC GGGTGCAGCT GGCCGATGCC CGCGGCACGG TCTGGAGCGG CGACGCGATC
CTGGTCCTTA GCGCGGGTGT CGGCAGCCGC GACGCCCGCG CCCTGCCCGG CCGCATCGAC
TGGACGCTGC GCCCGCAGGC GAGCCTGGCC GGCCTGGGCC TGCAGCTCGG CCTGCGCCAG
GACTGCTGCA TCAACGGCCA GACCCGCATC GCCCTGCAGC CCGGCTGGGG CCGGCTGCGC
GCCAGCGTCG CCAGCAGCGC CGTCGGCGCG GCGGCCGGAG CCGACGCCAG CTGGCTGGGC
CAGTGGCCGG CCGCGCTGCT GACCGGCCTG GGCACGCCCT GGAACACCCT GCAACCCGGC
GGCGCGCTGC GCCTGTCGAC CCGGGACCTG GCCTTCGAGT GGGTCGCCGG ACGTTTTGCC
CTGACCGGCA GCGCCGGCCT CGAACTGCGC GATTTCTCGT CGCGCATCAC CACGCTGCCG
CGCCTGGGCA GCTACCGGGT GACGATCAGC GGCGACACGG CCCAGGCCGG CACCGCCCAG
GTCGGCCTCA GCACGCTCGA CGGCGCCCTG CAGCTCAGCG GCAGCGGCAG CTGGAGCGCC
AGCGGCCTGC GCCTGCGCGG TGAAGCCACC GCCGCCGAAG CCGATCAGCC GGCGCTCGAC
AACCTGCTCA ACATCATCGG GCGGCGCGAC GGCGCGCGGT CCGTGCTCAC GATCGGATGA
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| Protein sequence | MSRLDVFTRR RSATQPLARG SALNTAGRGS RRTRQALDNG WAIAAAASRR WALFGALFGG
LLALIVFAPA SWLAQAVSTA TGERVQLADA RGTVWSGDAI LVLSAGVGSR DARALPGRID
WTLRPQASLA GLGLQLGLRQ DCCINGQTRI ALQPGWGRLR ASVASSAVGA AAGADASWLG
QWPAALLTGL GTPWNTLQPG GALRLSTRDL AFEWVAGRFA LTGSAGLELR DFSSRITTLP
RLGSYRVTIS GDTAQAGTAQ VGLSTLDGAL QLSGSGSWSA SGLRLRGEAT AAEADQPALD
NLLNIIGRRD GARSVLTIG
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