| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3421 |
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| Symbol | |
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| ID | 6162074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3804811 |
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| End bp | 3805152 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666196 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001792444 |
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| Protein GI | 171060095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000443599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACGCTGA TCGAGGTGCT GGTGGCGCTG GTGATCGTCG CCATCACGCT GGCGGCGGGC
ATCAAGGCCG CCGCGGCGCT GACGGCCAAC ACCCAGCGCC TGGCCGATAC CCTGGCGGCG
CAGTGGTGCG CTGACAACCA GCTCACCGAG CTGCGCCTGC AGCGCCAGTT CCCGCCGGTC
GGCGACCTCG AATTCAGCTG CGAGCAGCTC GGCCAGAGCT ACCGCGGCAC GCTGGTGGTG
CGGCCGACGC CGAACCCGAA CTTCCGACGC GTCGATGCCC GCATCGCCGA CGCCCAAGGC
CGGCCGCTGC TGCAGCTGTC GACCATCCTG CCGCGCATCT GA
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| Protein sequence | MTLIEVLVAL VIVAITLAAG IKAAAALTAN TQRLADTLAA QWCADNQLTE LRLQRQFPPV
GDLEFSCEQL GQSYRGTLVV RPTPNPNFRR VDARIADAQG RPLLQLSTIL PRI
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