| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3419 |
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| Symbol | |
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| ID | 6162072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3803828 |
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| End bp | 3804280 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666194 |
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| Product | general secretion pathway protein G |
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| Protein accession | YP_001792442 |
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| Protein GI | 171060093 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000422428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGTC CCGAGCGTTT GAAATCCATG ACCCGAGCCC TGCGCGCCAG CCGCGGCTTC
ACGCTGATCG AGCTGATGGT GGTGCTGGTG ATCATCGGCG TGCTGGCCGC GCTGGTGGTG
CCCAACGTGC TCGACCGCGC CGACGACGCC CGCGTGACCG CCGCCAAGAC CGACATCAAC
AACCTGATGC AGGCACTCAA GCTCTACAAG CTCGACAACC AGCGCTACCC GACCAGCGAG
CAGAACCTGC AGGCGCTGGT GGCCAGGCCG AGCGCCGGCC CGAACCCGCC CAACTGGAAG
CCCTATCTCG AGAAGCTGCC CAACGACCCG TGGGGTCGGC CCTACCAGTA CGCCAACCCG
GGCGTGAAGG GCGAGATCGA CGTGTTCAGT TTCGGCGCCG ACGGCCAATC CGGAGGCGAA
GGCAAGGATG CCGATCTGGG CTCGTGGCAA TGA
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| Protein sequence | MMRPERLKSM TRALRASRGF TLIELMVVLV IIGVLAALVV PNVLDRADDA RVTAAKTDIN
NLMQALKLYK LDNQRYPTSE QNLQALVARP SAGPNPPNWK PYLEKLPNDP WGRPYQYANP
GVKGEIDVFS FGADGQSGGE GKDADLGSWQ
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