Gene Lcho_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3414 
Symbol 
ID6162421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3798894 
End bp3799544 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID641666189 
Productputative ubiquinone biosynthesis protein 
Protein accessionYP_001792437 
Protein GI171060088 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000230541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAAA TGCAACACCC CATCGATCGC CTGCTCGCCA CGGCCGAGAT CGGATTGCGC 
ACAGTGTGGG GGCATCACCA CGCTCGGCGC CCTCACCCGA CGCCCGAAGC GTCAGGCCAG 
ATGCCCGCCG TCGAGCTGAG CCCGGCCGAG CAGCAGCTCG CCGGTGCGCT GATGCGGGTC 
AACCATGTGG GCGAGGTGTG CGCGCAGGCG CTCTACAACG CGCAGGCGCT GGCCACGCCC 
GATCCGGCCT TGCGGGCGCA TTTCGATGCC GCCGCCGCCG AAGAGGTCGA CCACCTGGCC 
TGGACCGAGC AGCGCCTCAA GGAACTCGGC AGCCGGCCGT CGCTGCTCAA CCCGCTGTGG 
TACGCCGGCG CCTTCGCGAT CGGCCTGGCC GCAGGCCGCA TGGGCGAGCG CACCAGCCTC 
GGTTTCGTGA TCGAGACCGA GCGCCAGGTC GAGCAGCATC TGCAGAGCCA TCTCGACCGC 
CTGCCCGCGC AGGACAGCGC CTCACGCGCG ATCGTCACGC AGATGCGCGA CGACGAAGCC 
CGCCACGCCC GGGATGCCGA ATCCGCCGGG GGCGTGCGCC CGCCCGCGCC GGTGCGCTGG 
CTGATGCGCG CCGCGGCCAA GGTCATGACG GGCACGGCAC ACCACATCTG A
 
Protein sequence
MTQMQHPIDR LLATAEIGLR TVWGHHHARR PHPTPEASGQ MPAVELSPAE QQLAGALMRV 
NHVGEVCAQA LYNAQALATP DPALRAHFDA AAAEEVDHLA WTEQRLKELG SRPSLLNPLW 
YAGAFAIGLA AGRMGERTSL GFVIETERQV EQHLQSHLDR LPAQDSASRA IVTQMRDDEA 
RHARDAESAG GVRPPAPVRW LMRAAAKVMT GTAHHI