Gene Lcho_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3389 
Symbol 
ID6162077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3768167 
End bp3768430 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content68% 
IMG OID641666164 
Productsulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_001792412 
Protein GI171060063 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC TGCCTGAACG CCTGACCCAC GTCGAAACGC CACCGACGTT GCGCAGTCTT 
TTTGCCGAGA TGGACGCCTT GCCCGCGGGC ACGTCGGTCG TCATCGATGG CCATCAGCTG
GGGCGCTTCG ATTCGAGTGC CCTGGGCCTG CTGCTGTCGT GTCGCCGCCA CGCCCAGACG
CACGGACGCG GGTTTTCGAC CCAGGCCCTG CCGCAGCGCC TGGTGCGCCT GGCCTCGCTC
TACGGCCTGT CCGGCTGCAT CTGA
 
Protein sequence
MLSLPERLTH VETPPTLRSL FAEMDALPAG TSVVIDGHQL GRFDSSALGL LLSCRRHAQT 
HGRGFSTQAL PQRLVRLASL YGLSGCI