| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3386 |
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| Symbol | |
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| ID | 6163370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3764517 |
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| End bp | 3765464 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666161 |
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| Product | transaldolase B |
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| Protein accession | YP_001792409 |
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| Protein GI | 171060060 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC TCGACCAACT CAAGCGCCTC ACCACCGTGG TCGCCGACAC CGGCAACTTC
CTGCAGTTGG CGCAGTTCGC GCCGCAAGAT GCCACCACCA ACCCGTCGCT GATCCTCAAG
GCGGTGCAGC AGGCCGAGTA CGCGCCGCTG CTGACCGAAA CCGTCGCCCG CCACCGCGGC
CTGCCGCTCG ACCAGGTGGT CGACCAGGTG CTGGTGCGCT TCGGCCTCGA GATCCTGAAG
ATCGTGCCCG GCCGCGTCTC GACCGAAGTC GACGCCCGCC TGAGCTTCGA CACCGCCGCC
ACCGTGGCGC GCGCGCACCG CATCATCAAT CTGTACGACG ACGCCGGCAT CGGCCGCGAG
CGGGTGCTGA TCAAGATCGC CTCCACCTGG GAAGGCATCC AGGCCGCCGC CGAGCTGGAG
CGCGAGGGCA TCCACTGCAA CCTGACGCTG CTGTTCGCCT TCGCGCAGGC GGTGGCCTGC
GGCGCAGCGG GCGTGCAGCT GATCTCGCCG TTCGTGGGCC GGATCTACGA CTGGTACAAG
AAGTCGGCCG GCGCCAACTG GGACGAGGCC GCGATGGCCG GTGCCAACGA CCCCGGCGTG
AAGTCGGTGG CGCAGATCTA CAGCTACTAC AAGAAGTTCG GCATCGCCAC CGAGGTGATG
GGCGCGAGCT TCCGCAACGT CGGCCAGATC ACCGCGCTGG CCGGCTGCGA CCTGCTGACC
ATCAGCCCCG ACCTGCTGGC GCAATTGCAG GCCAGCGAGG AGCCGATCAG CGCCGCCCTC
GACGCCGCCG CGGCCCGCGA CGCCGCGATC GACGCGGTCC GCTACGACGA GCCCGGTTTC
CGTTTCGCGC TCAACGAAGA CGCGATGGCC ACCGAGAAGC TTGCCGAAGG CATCCGCGCC
TTCGCGGCCG ATGCCGCCAA GCTCGACAAG ATGATCCTGG CGCTCTGA
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| Protein sequence | MNQLDQLKRL TTVVADTGNF LQLAQFAPQD ATTNPSLILK AVQQAEYAPL LTETVARHRG
LPLDQVVDQV LVRFGLEILK IVPGRVSTEV DARLSFDTAA TVARAHRIIN LYDDAGIGRE
RVLIKIASTW EGIQAAAELE REGIHCNLTL LFAFAQAVAC GAAGVQLISP FVGRIYDWYK
KSAGANWDEA AMAGANDPGV KSVAQIYSYY KKFGIATEVM GASFRNVGQI TALAGCDLLT
ISPDLLAQLQ ASEEPISAAL DAAAARDAAI DAVRYDEPGF RFALNEDAMA TEKLAEGIRA
FAADAAKLDK MILAL
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