| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3378 |
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| Symbol | |
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| ID | 6161078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3753492 |
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| End bp | 3754760 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666153 |
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| Product | putative glucose/sorbosone dehydrogenase |
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| Protein accession | YP_001792401 |
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| Protein GI | 171060052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT TCACTTTGGG CGCACTGGCC ACCGCGGTGG CCTTGCTGGT GGCGGGCGCG
GTACAGGCGC AGGCGCCGAA CATCGAGAAC CTCAAGCAGA TGAAGGTGTC GGGCGTCGAC
CCGTCGATGC CGCCGGTGCC GCAGGAGGGC AAGAACGCCG CCGCGCTGCG CGAGAACCTC
AAGCGCGTCA AGCTGCCGCC GGGCTTCAAG ATCGAGCTCT ACGCGGTGGT GCCCGATGCG
CGCCACATGG CGGTGGCGCC GAGCACCAAC ATGCTGTTCG TCGGCACCCG CAAGAGCACC
GTCTGGGCCG TCACCGACCG CAACAGCGAC GGCGTGGCCG ACGAGGTCAA GCCGTTCGCG
CCGTCGGCCA AGTTCCACGT GCCCAACGGC GTGTGCTGGA CCAAGGACGG CTTCCTGATC
GTGGTCGAGC ACAACCGGGT GCTCAACTTC CCGGCCGCCG AGTTCTTCTA CGAAGGCGGC
GACGTGGCGG TGATCGAGAC CGTGGCGCAA GGCAAGCTGA TCCCGCCCGA GGAGGAGTCG
TACAACCACC ACGCGCGCAC CTGCCGCATC GGCCCGGACG GCATGCTCTA CATCACCCTC
GGCCAGCCCT ACAACGTGCA GCCGCGCAAC AAGATCGACC TGTTCAACAA GGTCGGCATC
GGCGGCATCG TGCGCATGAA CGCCTTTGAC GGCTCCAAGC GCGAGGTCTA CGCCACCGGC
ATCCGCAACT CGGTGGGCAT CGAGTTCAAC CCCAAGGACA AGACCGTCTG GTTCACCGAC
AACCAGACCG ACGGCATGGG CGACGACATC CCCAACGGCG AGATCAACCG CGCCACCCGG
GCCGGCCAGT TCTTCGGCTA CCCGTGGAAG CAGGGCAAGA CGCGCATGAC CGACTTCGGC
TACGACAAGG ATCCGCTGCC CGCCAACATC ACCGACCCGC AGGTCTACAT GGACGCGCAT
GCGGCCGATC TGGGCCTGGC GTTCTACACC GGCAAGACCT TCCCGGCCAA GTACCAGGGC
GGCCTGTTCT CGGCCCAGCA CGGCTCGTGG AACCGCACCA CACCGATCGG CGCGCGCATC
ATGTTCACCA GCCTGAAAGC CGACGGCACG GCCGACAAGA CCGAGGTGTT CGCCGACGGC
TGGCTCGACG CCGACACCGG CCTCTACCGC GGCCGCCCGG TCGACGTGGC GATGATGAAG
GACGGCTCGA TGCTCGTCAG CGACGACTTC GCCGGCGCGC TCTACCGCAT CAGCTACAGC
GCGCCGTAA
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| Protein sequence | MKTFTLGALA TAVALLVAGA VQAQAPNIEN LKQMKVSGVD PSMPPVPQEG KNAAALRENL
KRVKLPPGFK IELYAVVPDA RHMAVAPSTN MLFVGTRKST VWAVTDRNSD GVADEVKPFA
PSAKFHVPNG VCWTKDGFLI VVEHNRVLNF PAAEFFYEGG DVAVIETVAQ GKLIPPEEES
YNHHARTCRI GPDGMLYITL GQPYNVQPRN KIDLFNKVGI GGIVRMNAFD GSKREVYATG
IRNSVGIEFN PKDKTVWFTD NQTDGMGDDI PNGEINRATR AGQFFGYPWK QGKTRMTDFG
YDKDPLPANI TDPQVYMDAH AADLGLAFYT GKTFPAKYQG GLFSAQHGSW NRTTPIGARI
MFTSLKADGT ADKTEVFADG WLDADTGLYR GRPVDVAMMK DGSMLVSDDF AGALYRISYS
AP
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