| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3374 |
|---|
| Symbol | |
|---|
| ID | 6161074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3751072 |
|---|
| End bp | 3752115 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641666149 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_001792397 |
|---|
| Protein GI | 171060048 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCA AGGACTACTA CCAGCTGCTC GGCGTCTCGC GCGATGCCGG CGCCGACGAC
ATCAAGAAGG CCTACCGGCG CATGGCGCGC AAGTTCCACC CCGACGTCAG CAAGGAGCCC
GACGCCGCCG CGCGCATGAG CGAGGTCAAC GAGGCGCACG CGGTGCTGTC CGATACCGAG
CGGCGCGCCG CCTACGACGC CATCGCGCAG GGCCGCCGCC AGGGCGAGCG CTTCACGCCG
CCGCCCGACT GGGACGCCGG TTTCGAGTTT TCGGGCCGCG GTTTCGACGG CAGGGGCCGC
GGCGACGAGG CCGGCGGGCA CAGCGACTTC TTCGACCAGC TGTTCGGCCG CATGGCCGGG
GGTGCGCGTC GGCCCGGGCG TGCGGCGGGG CGGGGCGCGG GCGGCTTCAA GGTGCGTGGC
GCCGACCACC ACGCCAAGAT CGTGCTCGAC CTGGCCGATG CGTTTTCAGG TGCCACCCGC
CAGGTCACGC TGCGCAGCCC GCGCAGCGAC GAACACGGCC GCGTCTCGCT CGCGCCGCGC
ACGCTCGACG TGCGCATCCC CGCCGGCATC CGCCCCGGCC AGCAGATCCG CCTGGCCGGG
CAGGGCGGCG AGGGCGTCAG CGGCGCGCAG CCGGGCGACC TGTTCCTGGA GGTGCATTTC
CGCGCCCACC CGCTGTTCAC GGTCGACGGC GCCAACCTGA TCGCCGACCT GCCGCTGGCG
CCCTGGGAGG CCGCGCTCGG TGCGGTGGTG CCGGTCGAGC TGCCCGACGG ATCGAGCCTG
AAGGTGCGGG TGCCCAGCGG CGCGCAGAGC GGTGCCCAGC TGACCGTGCG CGGGCGCGGG
CTGCCGGCGG CATCGGCCGC GGCACCGGCC GGCGACCTCG ACCTGGTGCT GAAGGTGCTG
CTGCCGAGCG CCTTCGATCC GCGGGCGCGC AAGCTTTACG AGCAGATGGC CGCCGAGCTG
AGCGATTTCG ACGCCCGCAA GGTGGCGCGT GCCGAGGCCG AACGCCGCGC CGCGCCGGCC
GAAGACAGCG ACCGCGCGGC CTGA
|
|---|
| Protein sequence | MEFKDYYQLL GVSRDAGADD IKKAYRRMAR KFHPDVSKEP DAAARMSEVN EAHAVLSDTE
RRAAYDAIAQ GRRQGERFTP PPDWDAGFEF SGRGFDGRGR GDEAGGHSDF FDQLFGRMAG
GARRPGRAAG RGAGGFKVRG ADHHAKIVLD LADAFSGATR QVTLRSPRSD EHGRVSLAPR
TLDVRIPAGI RPGQQIRLAG QGGEGVSGAQ PGDLFLEVHF RAHPLFTVDG ANLIADLPLA
PWEAALGAVV PVELPDGSSL KVRVPSGAQS GAQLTVRGRG LPAASAAAPA GDLDLVLKVL
LPSAFDPRAR KLYEQMAAEL SDFDARKVAR AEAERRAAPA EDSDRAA
|
|---|
| |