| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3370 |
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| Symbol | |
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| ID | 6161039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3746579 |
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| End bp | 3747745 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666145 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001792393 |
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| Protein GI | 171060044 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTGG AGATCCTGGG GATCATGTCC GACCTGAGCA TCACACTCGA AGCTCTACAG
AGAAGCCGCA CGCAACTGCC GGTCAGCAGC TATTTCGACC AGGCACTCTT CGACAAGGAG
ATGCGCCAGA TCTTCCCCTC CGGACCACGC TACCTCGGGC ACGAGCGCAT GGTGCCCGAG
GTCGGCGATT ACCAGGCCCT GGCCAACGAA GGCGAGGGCC GCGCGCTGGT GCGCACGGCC
CAAGGCGTCG AGCTGGTGTC CAACGTCTGC CGGCACCGCC AGGCGGTGAT GCTCAAGGGC
CGTGGCAACA CCGGCTCCAA CGTGGTGTGC CCGCTGCACC GCTGGACCTA CGGCCTCGAC
GGCCAGCTGA TCGGCGCGCC GCACTTCAAG GAAGACCCGT GCCTGAACCT GCGCAACTAC
CCGGTGCAGA TCTGGAACGG GCTGGTCTTC GAGGCGAACG TGGACGGTCA GGGCCGTGAC
GTCGCTGCCG ACCTGGCGGG CCTGGGGCCG CGTGCCGAGC TCGACTTCGA GGGTTATGTC
TTCGACAAGG TCATCCAGCA CGAGTGCAAC TACAACTGGA AGACCTTCAT CGAGGTCTAC
CTCGAGGACT ACCACGTCGG CCCGTTCCAC CCCGGCCTGG GCAACTTCGT CACCTGCGAA
GACCTGCGCT GGGAGATGGG CCGCGAGTAC TCGGTGCAGA CCGTCGGCGT GGCGCAGGGC
GCGGGCAAGG CGCTGGGGCG CTCGGGTTCG CCGGTCTACG AGCGCTGGCA CGAACAGGTG
CTGCGTTTCC AGAACGGCGT CACGCCCAAG CACGGCGCGA TCTGGCTGAC CTACTACCCG
CACATCATGG TGGAGTGGTA TCCCAACGTG CTGACGGTGT CGACGCTGCA GCCGATCAGC
CCGACCAAGA CGCTCAACAC GGTGGAGTTC TACTACCCCG AGGAGATCGC CGCCTTCGAG
CGTGACTATG TCGAGGCCCA GCAGGCCGCG TACATGGAAA CCTGCATCGA GGACGACGAG
ATCGGCGAGC GCATGGACGC CGGACGCCTG GCGCTGCTGA AGCGCGGCGA CAACGAGTTC
GGCCCCTACC AGAGCCCGAT GGAAGACGGC ATGCAGCACT TCCACGAGTG GTATCGCCGC
CAGATGGGCG ACGCGGCGAT CGACTGA
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| Protein sequence | MHLEILGIMS DLSITLEALQ RSRTQLPVSS YFDQALFDKE MRQIFPSGPR YLGHERMVPE
VGDYQALANE GEGRALVRTA QGVELVSNVC RHRQAVMLKG RGNTGSNVVC PLHRWTYGLD
GQLIGAPHFK EDPCLNLRNY PVQIWNGLVF EANVDGQGRD VAADLAGLGP RAELDFEGYV
FDKVIQHECN YNWKTFIEVY LEDYHVGPFH PGLGNFVTCE DLRWEMGREY SVQTVGVAQG
AGKALGRSGS PVYERWHEQV LRFQNGVTPK HGAIWLTYYP HIMVEWYPNV LTVSTLQPIS
PTKTLNTVEF YYPEEIAAFE RDYVEAQQAA YMETCIEDDE IGERMDAGRL ALLKRGDNEF
GPYQSPMEDG MQHFHEWYRR QMGDAAID
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