Gene Lcho_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3369 
Symbol 
ID6161038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3745343 
End bp3746488 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID641666144 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001792392 
Protein GI171060043 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA AGCCCATCAT CGCGATCTCG GCACTGGCCG TCCTGCAAGC CTGCGGCGGC 
GGCGACGACA GCTCGCCCGC CCTCCAGTTC AAGACCTTGT CGGGCGCTGC CCCGCTGGTG
ATCGGCCATC GTGGCGCCAG CGGCGAGTTG CCCGAGCACA CGCTGGAGTC GTACGAGCGC
GCGATCGCGC GCGGTGCCGA CTTCATCGAG CCCGATCTGG TGCTGACCTC CGATGGCGTC
ATGATCGCCC GCCACGAGCC GATGCTCGAC GGCACCACCG ACGTGGCCGT CAAGTTCCCC
GGCCGCCAGA CCACCAAGGT GCTCGATGGC GTGTCGACCA CGGCCTACTT CGCCAGCGAC
TTCACGCTCG CCGAGATCAA GACGCTGCGC GCCATCCAGG CCCGGGCCGG CCGCTCGACC
GCGTTCGACG GCCTCTACGG CATCCCGACG CTGGCCGAGG TGATCACCCT CGCGCAGACC
AAGGGCGCCG CTGCCGGCCG CACCGTGGGC ATCTACCCGG AGATCAAGCA CTCGACCTTC
CACGCCGGCC TGTTCGGGGC CAACGTGTTC GAGGACAAGC TGGTCGCGAC GCTGCACCCG
ATCTACGGCA ATTCGGGCAC CGCGCCGGTG TTCATCCAGT CGTTCGAGGT GTCCAACCTG
CAGTACCTCA ACACCCAGAC CGACATCCGC CTGGTGCAGC TGATCGACGC CGACGATGTC
AACGCCGACG GCTCGATGTC GCTGGTCGCG CCGTTCCGCC AGCCCTACGA CTTCGTGGTG
GCGGGTGATG CGCGCCTGTT CTCCGACCTG CTGAGCGACG CCGGCCTGAC CTTCGTGAAG
ACCTATGCCG ATGCGGTCGG CCCGTGGAAG CCCTATCTCG TCAAGACGGT CAACGACGGC
GTGGAACGCA CCGGCGACAG CACGCTGACG ATCAACGACC GACGCGTCGA CGGCAGCACC
GGCGTGATCG AAGCCGCACA CGCCAAGGGC CTGCTGGTGC ACACCTGGAC CTTCCGCGAC
GACGCCAGCG GCTACGGCTT CAAGGATCCG AAGGCCGAGA TGCAGTACTA CATGAAGCTC
GGCATCGACG GCGTGTTCAC CGACTTCCCG GCCACCGGCG TCGCGGCGCT GAAGGAACTG
CGCTGA
 
Protein sequence
MRIKPIIAIS ALAVLQACGG GDDSSPALQF KTLSGAAPLV IGHRGASGEL PEHTLESYER 
AIARGADFIE PDLVLTSDGV MIARHEPMLD GTTDVAVKFP GRQTTKVLDG VSTTAYFASD
FTLAEIKTLR AIQARAGRST AFDGLYGIPT LAEVITLAQT KGAAAGRTVG IYPEIKHSTF
HAGLFGANVF EDKLVATLHP IYGNSGTAPV FIQSFEVSNL QYLNTQTDIR LVQLIDADDV
NADGSMSLVA PFRQPYDFVV AGDARLFSDL LSDAGLTFVK TYADAVGPWK PYLVKTVNDG
VERTGDSTLT INDRRVDGST GVIEAAHAKG LLVHTWTFRD DASGYGFKDP KAEMQYYMKL
GIDGVFTDFP ATGVAALKEL R