Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3369 |
Symbol | |
ID | 6161038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3745343 |
End bp | 3746488 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641666144 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001792392 |
Protein GI | 171060043 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCA AGCCCATCAT CGCGATCTCG GCACTGGCCG TCCTGCAAGC CTGCGGCGGC GGCGACGACA GCTCGCCCGC CCTCCAGTTC AAGACCTTGT CGGGCGCTGC CCCGCTGGTG ATCGGCCATC GTGGCGCCAG CGGCGAGTTG CCCGAGCACA CGCTGGAGTC GTACGAGCGC GCGATCGCGC GCGGTGCCGA CTTCATCGAG CCCGATCTGG TGCTGACCTC CGATGGCGTC ATGATCGCCC GCCACGAGCC GATGCTCGAC GGCACCACCG ACGTGGCCGT CAAGTTCCCC GGCCGCCAGA CCACCAAGGT GCTCGATGGC GTGTCGACCA CGGCCTACTT CGCCAGCGAC TTCACGCTCG CCGAGATCAA GACGCTGCGC GCCATCCAGG CCCGGGCCGG CCGCTCGACC GCGTTCGACG GCCTCTACGG CATCCCGACG CTGGCCGAGG TGATCACCCT CGCGCAGACC AAGGGCGCCG CTGCCGGCCG CACCGTGGGC ATCTACCCGG AGATCAAGCA CTCGACCTTC CACGCCGGCC TGTTCGGGGC CAACGTGTTC GAGGACAAGC TGGTCGCGAC GCTGCACCCG ATCTACGGCA ATTCGGGCAC CGCGCCGGTG TTCATCCAGT CGTTCGAGGT GTCCAACCTG CAGTACCTCA ACACCCAGAC CGACATCCGC CTGGTGCAGC TGATCGACGC CGACGATGTC AACGCCGACG GCTCGATGTC GCTGGTCGCG CCGTTCCGCC AGCCCTACGA CTTCGTGGTG GCGGGTGATG CGCGCCTGTT CTCCGACCTG CTGAGCGACG CCGGCCTGAC CTTCGTGAAG ACCTATGCCG ATGCGGTCGG CCCGTGGAAG CCCTATCTCG TCAAGACGGT CAACGACGGC GTGGAACGCA CCGGCGACAG CACGCTGACG ATCAACGACC GACGCGTCGA CGGCAGCACC GGCGTGATCG AAGCCGCACA CGCCAAGGGC CTGCTGGTGC ACACCTGGAC CTTCCGCGAC GACGCCAGCG GCTACGGCTT CAAGGATCCG AAGGCCGAGA TGCAGTACTA CATGAAGCTC GGCATCGACG GCGTGTTCAC CGACTTCCCG GCCACCGGCG TCGCGGCGCT GAAGGAACTG CGCTGA
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Protein sequence | MRIKPIIAIS ALAVLQACGG GDDSSPALQF KTLSGAAPLV IGHRGASGEL PEHTLESYER AIARGADFIE PDLVLTSDGV MIARHEPMLD GTTDVAVKFP GRQTTKVLDG VSTTAYFASD FTLAEIKTLR AIQARAGRST AFDGLYGIPT LAEVITLAQT KGAAAGRTVG IYPEIKHSTF HAGLFGANVF EDKLVATLHP IYGNSGTAPV FIQSFEVSNL QYLNTQTDIR LVQLIDADDV NADGSMSLVA PFRQPYDFVV AGDARLFSDL LSDAGLTFVK TYADAVGPWK PYLVKTVNDG VERTGDSTLT INDRRVDGST GVIEAAHAKG LLVHTWTFRD DASGYGFKDP KAEMQYYMKL GIDGVFTDFP ATGVAALKEL R
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