Gene Lcho_3355 details

Gene Information

• Locus tag: Lcho_3355
• ID: 6160333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 3731862
• End bp: 3732317
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641666130
• Product: hypothetical protein
• Protein accession: YP_001792378
• Protein GI: 171060029
• COG category: [R] General function prediction only
• COG ID: [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 46
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGATC GCCTCGAGCG CAGCAGCGTG CCGCAACATG TGATCAGCGC CGAGGCAGCC 
GCGCAGGCGG TGGCCGCCGC GGTGGCGCAC GCCGGCACGC TGGGCGTGCG CATCAACGCC 
GCGGTGGTCG ACGGTGGCGG CACGCTGGCC GCCTTCCTGC GCATGCCGGG TGCCTTTCTG 
CATTCGGTCG AGATCGCGAT CGACAAGGCC TACACCGCGG CGAGTTTCGG CTTCCCGACG 
GCGCAGTGGC CGGCGGTGTT CGGCAGCGAC GAGCTGCTGC GCATCGGCCT GTCGCAGCGC 
CCGCGCCTGG TCGTGATCGG CGGGGGTTTG CCGATCCATC TCAAAGGCCC CGATGGCAGC 
GCGCTGATCG GCGGCATCGG CGTCTCGGGC GCCTCGGCCG AGCAGGACGA AGCCTGTGCT 
CTCGCGGGCC TGCGGGCGAT CGGCCTTACA TCCTGA 

 

Protein sequence

MSDRLERSSV PQHVISAEAA AQAVAAAVAH AGTLGVRINA AVVDGGGTLA AFLRMPGAFL 
HSVEIAIDKA YTAASFGFPT AQWPAVFGSD ELLRIGLSQR PRLVVIGGGL PIHLKGPDGS 
ALIGGIGVSG ASAEQDEACA LAGLRAIGLT S