| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3354 |
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| Symbol | |
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| ID | 6160332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3730361 |
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| End bp | 3731815 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666129 |
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| Product | 2-hydroxymuconic semialdehyde dehydrogenase |
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| Protein accession | YP_001792377 |
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| Protein GI | 171060028 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03216] 2-hydroxymuconic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAGT TCCTCAACTT CATCAACGGC GAATTCGTCG CCACCGGCAA GACCTTCGAG
AACCGCGCGC CGGTCGACAA CCGCGTGCTG GGCCTCGTGC ACGAGGCCGG TCAGCGCGAG
GTCGACGCGG CGGTGGCGGC GGCGCGCGCC GCGCTGAAGG GCCCGTGGGG CCGCATGAGC
GTGGTCAAGC GGGTCGAGCT GCTGCACGCG GTGGCCGACG AGATCAACCG CCGCTTCGAC
GACTTCCTGG CCGCCGAGAT CGCCGACACC GGCAAGCCGC TGAGCCTGGC CTCGCACATC
GACATCCCGC GCGGCGCGGC CAACTTCAAG GTCTTCGCCG ACATCGTCAA GAACGTGCCG
ACCGAGAGCT TCGAGATGAC CACCCCCGAC GGTGGCACCG CCGTCAGCTA CGGCCTGCGC
ACGCCGGTGG GCGTGGTCGC GGTGGTCTGC CCGTGGAACC TGCCGCTGTT GCTGATGACC
TGGAAGGTCG GCCCGGCGCT GGCCTGCGGC AACACCGTGA TCGTCAAGCC GAGCGAAGAA
ACACCCGCCA CCGCCACGCT GCTGGGCGAG GTGATGAAGG CGGTCGGCGT GCCCGACGGC
GTCTACAACG TGGTGCACGG CTTCGGCCCC GGTTCGGCCG GCGAGTTCCT GACGAAGCAT
CCGGGCGTCA ACGCCATCAC CTTCACCGGC GAGACGCGCA CCGGCGAGGC CATCATGGCG
GCCGCGGCCA AAGGCGTGCG GCCGGTGTCG TTCGAGCTGG GCGGCAAGAA CGCCGGCATC
GTGTTCGCGG ACGCCGACTT CGACAAGGCG GTGGCCGGCA TCACGCGCAG CGCGTTCGAG
AACTGCGGCC AGGTGTGTCT CGGCACCGAG CGTGTCTACG TGCAGCGGCC GATCTTCGAC
CGCTTCGTGG CCGCATTGAA GGACAAGGCC GAGGCGCTCC AGATCGGCCC GTCCGAGCAG
CCCGGCGTCG GCCTGGGTCC GCTGATCTCG GCCGAACACA AGCAGAAGGT GCTCGGCTAT
TACGCCAAAG CCAAGGCCGA AGGCGCGACG ATCGTGACCG GTGGCGGCGC GCCGCAGATG
CCCGGCGCAT TGGCCGAAGG CCATTGGGTG CAGCCGACGA TCTGGACCGG CCTGCCCGAG
AGCGCCAGCG TGATCCGCGA GGAGATCTTC GGACCCTGCT GCCACATCGC GCCCTTCGAC
ACCGAGGACG AAGCCATTGC GCTGGCCAAC GCCACCGACT ACGGCCTGGC CACCACGGTG
TGGACGCAGA ACCTCGGCAC CGCGCACCGC ATGGCCAGCG CGATCGAAGT GGGGCTGTGC
TGGATCAACA GCTGGTTCCT GCGCGATTTG CGGACGGCGT TCGGCGGCGC CAAGGCCTCG
GGCATCGGCC GCGAGGGCGG GGTGCATTCG CTGGAGTTCT ACACGGAGCT GAGGAACGTG
ATGATCAAGC TGTGA
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| Protein sequence | MQQFLNFING EFVATGKTFE NRAPVDNRVL GLVHEAGQRE VDAAVAAARA ALKGPWGRMS
VVKRVELLHA VADEINRRFD DFLAAEIADT GKPLSLASHI DIPRGAANFK VFADIVKNVP
TESFEMTTPD GGTAVSYGLR TPVGVVAVVC PWNLPLLLMT WKVGPALACG NTVIVKPSEE
TPATATLLGE VMKAVGVPDG VYNVVHGFGP GSAGEFLTKH PGVNAITFTG ETRTGEAIMA
AAAKGVRPVS FELGGKNAGI VFADADFDKA VAGITRSAFE NCGQVCLGTE RVYVQRPIFD
RFVAALKDKA EALQIGPSEQ PGVGLGPLIS AEHKQKVLGY YAKAKAEGAT IVTGGGAPQM
PGALAEGHWV QPTIWTGLPE SASVIREEIF GPCCHIAPFD TEDEAIALAN ATDYGLATTV
WTQNLGTAHR MASAIEVGLC WINSWFLRDL RTAFGGAKAS GIGREGGVHS LEFYTELRNV
MIKL
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