Gene Lcho_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3353 
Symbol 
ID6160331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3729981 
End bp3730319 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content69% 
IMG OID641666128 
ProductDNA polymerase beta subunit 
Protein accessionYP_001792376 
Protein GI171060027 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGT CTTCCGAGCC GGTGAGCGCG GTGCCGGACG TGGACATCCA GCCCGCGCAA 
TGGGCCATCG TGCGGGCGAT CCTGCAGCAG CAGGTGCCGG GCCGGGAGGT CTGGGCCTTC
GGTTCGCGCG CCCGCCGCAG TGCCAAGCCC TATTCAGACC TCGATCTGGC GGTACTGGGC
GATGCGCCCC TGAGCCTCGA TGAGCAGGCC GCGCTGTCCG AGGCGTTTGC CGAATCCGAC
CTGCCGTGGA AGGTGGATGT CGTGGACTGG GCCACGACCA GCGAAGGCTT CCGGCGGATC
ATCGAGCGGG ATCGGGTGGT GCTGCAGGCG CATGTGTAA
 
Protein sequence
MSRSSEPVSA VPDVDIQPAQ WAIVRAILQQ QVPGREVWAF GSRARRSAKP YSDLDLAVLG 
DAPLSLDEQA ALSEAFAESD LPWKVDVVDW ATTSEGFRRI IERDRVVLQA HV