| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3351 |
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| Symbol | |
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| ID | 6160716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3728061 |
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| End bp | 3729341 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666126 |
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| Product | citrate transporter |
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| Protein accession | YP_001792374 |
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| Protein GI | 171060025 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TGCCCGACCT GCCGACCGTC AACCTGCTCG GCCATGACGC CCTCGACCTG
GGCATCGTGG CCGTGTTCGC CGTGGTCTAC CTCGGCATGT TCCTCGGCGG CCTGCCGCGC
CTGAAACTCG ACCGCTCGGG CGTGGCGCTG CTCGGTGCCA TCGCCGTGAT CGCCATCACC
GGCCAGCCGG TCGAGGACGC CGCCCGCGCG GTCGACCTGC CGACCATCGT GCTGCTGTTC
GCCTTCATGG TGGTGTCGGC GCAGATGCGC CTGGGCGGCT TCTACACCGC GGTGACGCGC
CGGGTGGGCG CCATGCCGTT GTCGCGCCGC GGCCTGCTGG CGGCGCTGAT CGCGGTGGCC
GGCGCGATGT CGGCGGTGTT CTCCAACGAC ATCGTCTGCC TGGCGATGAC GCCGGTGGTG
GCGCAGCTGT GCCTGCAGCG CCGGCTCGAT CCGGTGCCGT TCCTGATCGG CCTGGCCTGC
GCGGCCAACA TCGGCTCGGC CGCCACGCTG ATCGGCAACC CGCAGAACAT GCTGATCGGC
TCGGTCATGC AGCTGCCCTT CGGCGGCTAC GTGCGCCAGG CCTTGCCGCC GGTGGCGCTG
AGCCTGGCGC TGCTGTGGCT GTGGCTGGCC TACGGGCCGG GCGCGTCGCA CGTGCAGGCG
CCCGAGGCGC TGCGGCCGAC CGAACTCGAC CCCGACGACG CCGCCCCGCT CGACCCCTTC
CAGACCGCCA AGGGCCTGCT GGTGGCCGGC GCGCTGATGC TGATTTTTTT GTTCACCGAC
TGGCCGCGCG ACGTGGCGGC GCTGGTCGGC GCGGCCGTGC TGCTGCTGAG CCGGCGGCTG
CATTCATCGC ACGTGATGGG TTTTGTCGAC TGGCAACTGC TGCTGCTGTT CATCGGCCTG
TTCGTCGTCA ACCATGCGTT CGAGCGCACC GGCCTGGCCT CGCAGGCCGT CGCCTGGCTG
GCCGGCCACG GCGTGCACCT GGCCGACCCC GGCCCGCTGC TGGTGGTGGG CGTGGCGCTG
TCGAATGTGG TCTCCAACGT GCCGGCGGTG ATGCTGATGC TGCCGCACCT GAAGGGCGAG
GCGGCCGGCG TGACGCTGGC GCTGGTCAGC ACCTTCGCCG GCAACCTGCT GCTGGTGGGC
TCGATCGCGA ACCTGATCGT GGTGGATCTG GCGCGCAAGA GTGGGATCGA GATTGACTGG
AGGCAGCATG CGGTCACGGG GATTCCGGTC ACGCTCGGGA CGTTGGGGCT GGTGTGGGGG
TGGTTGAGTT GGAGCGCTTG A
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| Protein sequence | MNLLPDLPTV NLLGHDALDL GIVAVFAVVY LGMFLGGLPR LKLDRSGVAL LGAIAVIAIT
GQPVEDAARA VDLPTIVLLF AFMVVSAQMR LGGFYTAVTR RVGAMPLSRR GLLAALIAVA
GAMSAVFSND IVCLAMTPVV AQLCLQRRLD PVPFLIGLAC AANIGSAATL IGNPQNMLIG
SVMQLPFGGY VRQALPPVAL SLALLWLWLA YGPGASHVQA PEALRPTELD PDDAAPLDPF
QTAKGLLVAG ALMLIFLFTD WPRDVAALVG AAVLLLSRRL HSSHVMGFVD WQLLLLFIGL
FVVNHAFERT GLASQAVAWL AGHGVHLADP GPLLVVGVAL SNVVSNVPAV MLMLPHLKGE
AAGVTLALVS TFAGNLLLVG SIANLIVVDL ARKSGIEIDW RQHAVTGIPV TLGTLGLVWG
WLSWSA
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