| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3343 |
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| Symbol | |
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| ID | 6161256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3720552 |
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| End bp | 3721334 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666118 |
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| Product | 2-oxopent-4-enoate hydratase |
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| Protein accession | YP_001792366 |
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| Protein GI | 171060017 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCAC TCACCATCCA ACGCTACGGC GACGAGCTCT ACCAGGCGCT CGTCAGCCGC
GAGGCCGTCG AGCCGCTCAC CAACCGCGAG CCCGGCATCA CCATCGACGA CGCGTACCAG
ATCCAGCTGC GCGTGATCCA GCGCCGGCTT GATGCCGGCG AGATCGTCAT CGGCAAGAAG
ATCGGCGTCA CCAGCAAGGT GGTGATGGAC ATGCTGGGCG TGAACCAGCC CGACTTCGGC
CACCTGCTGT CGGGCATGGT GTTCAACGAG GGCGAGCCGG TCGACACCGC CAAGCTGATC
GCACCCAAGG CCGAGGCCGA GGTGGCCTTC ATCCTGGCGC GTGACTTGAC CGGCCCGGGC
GTGACCGCGG CCGACGTGCT GCGCGCCACC GACTGCGTGA TGCCGTGTTT CGAGATCGTC
GACAGCCGCA TCCGCGACTG GAAGATCAAG ATCCAGGACA CGGTGGCGGA CAACGCCTCC
TGCGGCGTGC TCACGCTCGG CGGCACCCGC CGCAGCCCGC GTGACATCGA TCTGGCGCTG
GCCGGCATGG TGCTCGAGAA GAACGGCGAG ATCGTCAGCA CCTCGTGCGG CGCCGCGGTG
CAGGGCTCGC CGGTCAACGC GGTGGCGTGG CTGGCCAACA CGCTCGGGCG CCTGGGCATC
AGCCTGAAGG CGGGCGATGT GATCCTGTCG GGATCGCAAT CGCCGCTGGT GCCGGTCAAG
CCGGGCGACA GCCTGCATTG CAGCGTGGGC GGGCTGGGCA GCACGTCGGT GCGGTTTATT
TGA
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| Protein sequence | MDALTIQRYG DELYQALVSR EAVEPLTNRE PGITIDDAYQ IQLRVIQRRL DAGEIVIGKK
IGVTSKVVMD MLGVNQPDFG HLLSGMVFNE GEPVDTAKLI APKAEAEVAF ILARDLTGPG
VTAADVLRAT DCVMPCFEIV DSRIRDWKIK IQDTVADNAS CGVLTLGGTR RSPRDIDLAL
AGMVLEKNGE IVSTSCGAAV QGSPVNAVAW LANTLGRLGI SLKAGDVILS GSQSPLVPVK
PGDSLHCSVG GLGSTSVRFI
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