Gene Lcho_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3339 
Symbol 
ID6161252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3717442 
End bp3717633 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content64% 
IMG OID641666114 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_001792362 
Protein GI171060013 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTG CCCAGATCTA CCTGCTGGAA GGCCGCACCG AAGACCAGAA ACGCGCCGTG 
ATCGAGAAGG TGACGGCCGC GCTGGTCGAA GCGCTCGACG CGCCTCAGGC AAACGTCCGC
GTTTGGATCC ACGACATGCC CAAGGAGAAC TGGGGCATCG CCGGCAAGTC GGCCAAGGAC
CTCGGACGCT GA
 
Protein sequence
MPFAQIYLLE GRTEDQKRAV IEKVTAALVE ALDAPQANVR VWIHDMPKEN WGIAGKSAKD 
LGR