| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3338 |
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| Symbol | |
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| ID | 6160772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3716893 |
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| End bp | 3717327 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666113 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001792361 |
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| Protein GI | 171060012 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAAGC GCATCCTCGT TCCCACCGAT GGTTCGGACA TCACGGCCAA GGCCGTCGCC
ACCGCCGTGA CGCTGGCCAA GACGGTCGGC GCGCCGATCA GCGTGCTGGC GGTCAAGGAG
CCGTTCCCCT ACAGCGCGAT CTCGGAGATG CAGCCGATCC CGCCGCAGGA GTTCTTCGAT
TCGCAGGAGC GCATCGCCCT CAAGCACGTG CAGGCGGTCA AGGACGCCTG TGCCGCGGCC
GGTGTCGAAT GCTCTGCCGC GACGGTCGAG GCGCTGCACC CGTGGGAGGC CATCCTCGAG
TACGGCAAGG CGCAGGGTTG CGACCTGATC GTGATGGCCT CGCACGGCCG CCGCGGTGTG
GCGGCGCTGC TGCTGGGCAG CGAGACGCAG AAGGTGCTGA CGCACTGCGA CACGCAGGTG
CTGGTGGTGC GCTGA
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| Protein sequence | MYKRILVPTD GSDITAKAVA TAVTLAKTVG APISVLAVKE PFPYSAISEM QPIPPQEFFD
SQERIALKHV QAVKDACAAA GVECSAATVE ALHPWEAILE YGKAQGCDLI VMASHGRRGV
AALLLGSETQ KVLTHCDTQV LVVR
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