| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3324 |
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| Symbol | |
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| ID | 6163395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3699248 |
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| End bp | 3700384 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666099 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792347 |
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| Protein GI | 171059998 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCA TCGACTTCAA ACAAATCTGC AAGCGCTATG GCCCGGGTCT GCCGCTGACG
ATCAACAACG CCAACATCAC GATCGACAAG GGCGAGTTCT GCGTCTTCGT CGGGCCGTCG
GGCTGCGGCA AGTCGACGCT GCTGCGCATG GTGGCCGGTC TGGAAGACAT CACGTCCGGC
GACATGTCGA TCGGCGGCAC GCGGGTCAAC GACCTGCCGC CGGCCAAGCG CGGCGTGGCG
ATGGTGTTCC AGAGCTACGC GCTCTACCCG CACATGACGG TGGCCGAGAA CATGGCCTTC
GGCCTGCGCG TGATGGGCTC GGACAAGGCC GAGATCGACC GCAAGGTCAA GAAGGCCGGC
GACATCCTGC AGCTCGGCCC CTTGATGGAC CGCCTGCCCA AGGCGTTGTC GGGCGGCCAG
CGCCAGCGGG TGGCGATCGG CCGCGCGATC GTCAAGGAGC CCGACGTGTT CCTGTTCGAC
GAGCCGCTGT CGAACCTGGA TGCCGCGCTG CGCGTGCAGA CCCGCCTCGA GATCGCCAAG
CTGCACCACG ACATCGGCAC CGCCAGCATG ATCTACGTGA CGCACGACCA GGTCGAGGCG
ATGACGCTGG CCGACAAGAT CGTGCTGCTG CGCGCCGGCG CCGACGTGCA GACCAAGGGC
AGCGTGGCCC AGTTCGGCAC GCCGATGGAC CTCTACCACC GGCCGCAGAA CCTGTTCGTG
GCCGAGTTCA TCGGCAGCCC GAAGATGAAC ATCCTGCCCG GGCGCATCGT GCGTGTCGAA
GCCGACCATG CGGTGGTCGA GGTGCACGGC GAGCAGATCA CCGCGGCCGT CAATGCGCGC
GGCGCCAAGG CCGGCGACAA GGTGTCGCTG GGCATCCGCC CCGAACACCT GCTGACCGGC
GACGAAGGAC CGGGTTGTGC CTTGCACGTC ACGGTGCGCC AGCTCGAGCG GCTGGGCGAG
TCGTCGATGC TCTACCTCGA CGTCGCGCCC GATGCGCCGA TGGCGACGCT GCGGATCGAG
GGTTATGCCT CGCAATCGGC CGGTGACCGC GTCACGCTGC GCCTGCGCCC CGAGCAGTGC
CATCTGTTCG ACGCCAACGG CGAGGCTTTT GCCCGCACGG TCCAGCTGCC GGCCTGA
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| Protein sequence | MSRIDFKQIC KRYGPGLPLT INNANITIDK GEFCVFVGPS GCGKSTLLRM VAGLEDITSG
DMSIGGTRVN DLPPAKRGVA MVFQSYALYP HMTVAENMAF GLRVMGSDKA EIDRKVKKAG
DILQLGPLMD RLPKALSGGQ RQRVAIGRAI VKEPDVFLFD EPLSNLDAAL RVQTRLEIAK
LHHDIGTASM IYVTHDQVEA MTLADKIVLL RAGADVQTKG SVAQFGTPMD LYHRPQNLFV
AEFIGSPKMN ILPGRIVRVE ADHAVVEVHG EQITAAVNAR GAKAGDKVSL GIRPEHLLTG
DEGPGCALHV TVRQLERLGE SSMLYLDVAP DAPMATLRIE GYASQSAGDR VTLRLRPEQC
HLFDANGEAF ARTVQLPA
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