| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3315 |
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| Symbol | |
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| ID | 6160840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3683144 |
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| End bp | 3685000 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666090 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001792338 |
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| Protein GI | 171059989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG CGCTGGTGCA ACACCTCGCC GCCCTGCGCG TGGAGATGGC CGACGGCAGC
ATCGCGCCCT ATTGCGGCGG GGTGTTCACG ATCTTTGGCC ACGGCAACGT GGCCGGCATC
GGCGAGGCGC TGTATGCCCA GCGCGACCAC GCACAAAACC CGCTGCCGAC CTTCCGCGCC
CACAACGAAC AGGGCATGGC GCACGCGGCC ATCGCCTACG GCAAGGCGCA GTTCCGCCAG
CGCATCATGG CGGTGAGCAC CAGCATCGGC CCGGGCGCGA CCAACCTGGT CACGGCCGCC
GCGGTGGCGC ACGTCAACCG CCTGCCGGTG CTGCTGCTGC CGGGTGACAC CTTCGCCACC
CGCGCGCCCG ATCCGGTGCT GCAGCAGATC GAGAGCTTCA GCCAAGGCGA CCTGAGCGCC
AACGACTGCT TCCGCCCCGT CGTGCGCTAC TTCGACCGCA TCACCCGGCC CGAGCAGATC
CTGACCGCGC TACCGCGGGC GATCCAGGTC ATGACCGACC CGGCCTCGTG CGGCCCGGTC
TGCCTGGCGC TGCCGCAGGA CGTGCAGGCC GAGGCCTTCG ACTGCCCCGT GAGCTTCCTG
CAGCCCGCGC TGATCCGCTT CCGCCGCCCG CCCGCCGATG CCGGTGAGCT GGCGCGCGCC
GCCGAGGTGC TGAAGACCGC GAAGCGGCCG CTGATCGTCG CCGGTGGCGG CGTGTTGTAC
AGCCAGGCCA GCAACGAGTT GCGCGCCTTT GCCGAGGCGC ACGGCGTGCC GGTGGTCGAG
TCGCACGGCG GCAAGAGCAG CCTGGCGTGG GATCACCCGC TCAACCTCGG CGCCATCGGC
GTCGACGGCA TGAACGTGGC CAACGCGATG GCGCGCGAGG CCGATCTGGT GCTGGCCGTG
GGCACGCGCC TGCAGGACTT CACCACCGGC TCGCACGCGC TGTTCGCCAA GGCGAAACTG
CTGTGCCTGA ACGTGCAACC CTTCGACGCC GGCAAGTGGA ACGCCACCTC GCTGGTGGCC
GACGCCAAGC TCGGCCTGGG GCAGCTCTCG GCCGCTGCCG CCGGCTGGTC GGCCGATGCC
GGCTGGACCG ACAAGGCCCG CGCCGAAGCG GCCCGTGGCA ACGCCATCGT CACCGAGCTG
ACCACGGCGG TGCCGAAGGG CGTGCTGCCG TATGACGCCG AGGTGATCGG CGCGGTGCGC
GATTCGTTGA ATGACGCGGG CGGCGACAGC GGTCTCGACG ACATCGTCGT CTGCGCCGCC
GGCACGCTGC CGGCCGAGCT GCACAAGCTG TGGCGCTCAC GCGCGCCGGG CACGTATCAC
ATGGAATACG GCTACTCGTG CATGGGCTAC GAGATCGCCG GCGGCCTGGG CGCCAAGATG
GGCGCGCCGC ACCGCGAGGT GATCGTGATG GTGGGCGACG GCTCCTACAT GATGCTCAAC
GCCGAGATCG CCACCTCGGT GATGCTGGGT CTCAAGCTGA TCGTCGTCGT GCTCGACAAC
CGCGGCTACG GCTGCATCGA GCGGCTGCAG GGCAAGTCGG GCGTGCCGAG TTTCAACAAC
ATGCTCGACG ACTGCGTGCC CGAGGGCGGC CAGCCCAGCG AGATCGACTT CGCGATGCAC
GCCCGCGCGA TGGGCGCGCA CGCGGTGCAC GTCGCCGACG TGGCCGAGCT GAAGACCGCG
ATGGTGGCCG CGCGCGCCGC CCGCAAGACC CAGGTGATCG TGATCGACAC CACCCACACC
CGCACCACCG ACGGCGGCTG CTGGTGGGAG GTGGCGATCC CCGAGGTGTC GCAGCGCAGC
GAGGTGCAAG AAGCGCACGA ACGCTACGTC ACCGCCAAAC AAGACCAACG CCTCTGA
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| Protein sequence | MSQALVQHLA ALRVEMADGS IAPYCGGVFT IFGHGNVAGI GEALYAQRDH AQNPLPTFRA
HNEQGMAHAA IAYGKAQFRQ RIMAVSTSIG PGATNLVTAA AVAHVNRLPV LLLPGDTFAT
RAPDPVLQQI ESFSQGDLSA NDCFRPVVRY FDRITRPEQI LTALPRAIQV MTDPASCGPV
CLALPQDVQA EAFDCPVSFL QPALIRFRRP PADAGELARA AEVLKTAKRP LIVAGGGVLY
SQASNELRAF AEAHGVPVVE SHGGKSSLAW DHPLNLGAIG VDGMNVANAM AREADLVLAV
GTRLQDFTTG SHALFAKAKL LCLNVQPFDA GKWNATSLVA DAKLGLGQLS AAAAGWSADA
GWTDKARAEA ARGNAIVTEL TTAVPKGVLP YDAEVIGAVR DSLNDAGGDS GLDDIVVCAA
GTLPAELHKL WRSRAPGTYH MEYGYSCMGY EIAGGLGAKM GAPHREVIVM VGDGSYMMLN
AEIATSVMLG LKLIVVVLDN RGYGCIERLQ GKSGVPSFNN MLDDCVPEGG QPSEIDFAMH
ARAMGAHAVH VADVAELKTA MVAARAARKT QVIVIDTTHT RTTDGGCWWE VAIPEVSQRS
EVQEAHERYV TAKQDQRL
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