| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3312 |
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| Symbol | |
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| ID | 6160837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3678314 |
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| End bp | 3679861 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666087 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792335 |
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| Protein GI | 171059986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAG CCACCCTGGA AGCTGCACCG GCCGCGTCTG ACACGCCCGC CGTCGAGCGC
TCCACCGGCT ATCTGCTCGA AGTTCGCGGC GTGCGCAAGG CCTTTCCCGG CGTGGTCGCG
CTCGACGACG TGCAGTTCAA GTTGCGCCCC GGCACCGTGC ACGCGCTGAT GGGCGAAAAC
GGTGCCGGCA AGTCGACGCT GATGAAGATC ATCGCCGGCG TCTACATCCC CGATCAGGGC
GAGCTGCGCG TCAAGGGCAA GCCGCTCACG CTCACCGGCC CGCTCGATGC GCTGGAAAAC
GGCATCGCCA TGATCCATCA GGAGCTGAAC CTGATGCCGT TCATGACGGT GGCCGAGAAC
ATCTGGATCC GCCGCGAGCC GCTCAACCGC TTCGGTTTCG TCGACCACGC CGAGCTGCGG
CGGCGCACGC AGGCCCTGTT CGACCGCCTG GTGATCGACA TCGACCCCGA GACCGAGGTG
CGCAGCCTGT CGGTGGCCAG CCGCCAGATG GTCGAGATCG CCAAGGCGGT GTCGTTCGAC
TCCGACGTGC TGATCATGGA CGAGCCGACC TCGGCGCTGA CCGACAAGGA AGTGGCGCAC
TTGTTCCGCA TCATCGGGCA GCTGCGCAAG GCGGGCAAAG GCATCGTCTA CATCACGCAC
AAGATGAACG AGCTGTTCGA GATCGCCGAC GAGGTGTCGG TGTTCCGTGA CGGCAAGTAC
ATCGACACCC GGCTGTCGAG CGAGCTCACG CGCGACGACA TCATCAAGAT GATGGTGGGC
CGCGAGATCA CGCAGATGTT CCCGAAAGAA GAGGTGCCGA TCGGCGGCGT CGTCATGTCG
GTCAAGAACC TCGGTGTCGA GGGCCTCTTC CGTGACGTCA CCTTCGACCT GCGGGCCGGC
GAGATCCTCG GCCTGGCGGG GCTGGTGGGG TCGGGGCGCT CGAACGTGGC CGAGGCGCTG
TTCGGCGTGG TGCCGGCGAC GACCGGCTCG ATCGCCATCA ACGGCCGGAC GGTGGTGATC
GACACGCCCG CCGCGGCGAT GAAACACGGC ATGGCGTTTC TCACCGAAGA CCGCAAGGAC
ACCGGCTGTT TCCTGAGCCT CGACATCCTG GCCAACATGG ACACGGCGGT GCTGAGCCAG
CGCTACGTCA AGTTCGGTTT CGTGCAGAGC GCGCAGCTGC AGCGCGACTG CGAGGCGATG
GCGCAGTCGA TGCGGGTCAA GACGCCGACG CTGGCCGAGA TCATCCAGAA CCTCTCGGGC
GGCAACCAGC AGAAGGTGCT GATCGGGCGC TGGCTGCTGA CGAAACCGAA GATCCTGATC
CTCGACGAAC CCACCCGCGG CATCGACGTG GGCGCCAAGG CCGAGATCCA CCGGCTGGTC
AGCCAGCTCG CCGGCCAGGG CGTGGCGGTG CTGATGATCT CGTCGGAGAT GCCCGAGGTG
CTGGGCATGA GCGACCGGGT GATGGTGATG CACGAAGGCC GCATGACCGG CATCGTCGAG
CGCAAGGATG CCGACCAGGT CCGCATCATG GAGCTCGCCT CGCAATGA
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| Protein sequence | MSSATLEAAP AASDTPAVER STGYLLEVRG VRKAFPGVVA LDDVQFKLRP GTVHALMGEN
GAGKSTLMKI IAGVYIPDQG ELRVKGKPLT LTGPLDALEN GIAMIHQELN LMPFMTVAEN
IWIRREPLNR FGFVDHAELR RRTQALFDRL VIDIDPETEV RSLSVASRQM VEIAKAVSFD
SDVLIMDEPT SALTDKEVAH LFRIIGQLRK AGKGIVYITH KMNELFEIAD EVSVFRDGKY
IDTRLSSELT RDDIIKMMVG REITQMFPKE EVPIGGVVMS VKNLGVEGLF RDVTFDLRAG
EILGLAGLVG SGRSNVAEAL FGVVPATTGS IAINGRTVVI DTPAAAMKHG MAFLTEDRKD
TGCFLSLDIL ANMDTAVLSQ RYVKFGFVQS AQLQRDCEAM AQSMRVKTPT LAEIIQNLSG
GNQQKVLIGR WLLTKPKILI LDEPTRGIDV GAKAEIHRLV SQLAGQGVAV LMISSEMPEV
LGMSDRVMVM HEGRMTGIVE RKDADQVRIM ELASQ
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