Gene Lcho_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3309 
Symbol 
ID6161538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3675474 
End bp3675836 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content72% 
IMG OID641666084 
Producthypothetical protein 
Protein accessionYP_001792332 
Protein GI171059983 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA ACGTCCTGGG CACCGAACTG GTGGCCTGCT CATTCGACCC GCTGACGGGC 
TACTTCCGCG ACGGCTGCTG CAACACCCGG GCCGATGACC TCGGCACCCA CGTGGTCTGC
GCCCGGGTCA CGGCCGAGTT CCTGGCGTTC TCGACGGCGC GTGGCAACGA CCTGAGCACG
CCGCGGCCGG AGCACCGCTT TCGCGGCCTG CGGCCCGGCG ATCGCTGGTG CCTGTGCGTG
CTGCGCTGGA AAGAGGCCCA CGCGGCGGGC GTGGCGCCGC CGGTGGTGCT GGAGGCGACC
CACCAGGCGG CGCTCGAACA CGTCCCGCTC GACGTCCTGC GCACCTGCGA GTTCATGCCC
TGA
 
Protein sequence
MARNVLGTEL VACSFDPLTG YFRDGCCNTR ADDLGTHVVC ARVTAEFLAF STARGNDLST 
PRPEHRFRGL RPGDRWCLCV LRWKEAHAAG VAPPVVLEAT HQAALEHVPL DVLRTCEFMP