| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3302 |
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| Symbol | |
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| ID | 6162213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3669607 |
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| End bp | 3670611 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666077 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792325 |
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| Protein GI | 171059976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACG TCCGCCTCTC CGCCATCCGC AAGTCGTACA CCTCCGGCAC CACGGTGATC
CCGGGGCTCG ACCTGGAGAT CCCCGCGGGC TCCTTCACCG TGCTGGTCGG CCCGTCGGGC
TGCGGCAAGT CGACGCTGCT GCGCATGGTC GCGGGGCTGG AGTCGGTCAG CGGCGGCCAG
ATCCTGATCG GCGGCCGCGA CGTGACCCAC CTGGAGCCGG CCGATCGTGG CATCGCGATG
GTGTTCCAGT CGTACGCGCT CTACCCGCAC ATGACGGTGG CCGAAAACAT CGGCTTCCCG
CTGACCATCG CGCGCCGGCC CAAGGCCGAG ATCGACGCGG CGGTCAAGAA GGCCGCCGAC
GTGCTGCAGC TCGGCCCCCT GCTCGACCGC ACGCCCAAGG CGCTGTCGGG CGGCCAGCGC
CAGCGCGTGG CGATCGGCCG CGCGATCGTG CGCAACCCGT CGGTGTTCCT GTTCGACGAG
CCGCTCTCCA ACCTCGACGC CTCGCTGCGC GGGCAGATGC GCGTCGAGCT GGCCGACCTG
CACCGCAAGA TCGGCGCGAC CATGATCTAC GTGACGCACG ACCAGGTCGA GGCGATGACC
ATGGCCGACC AGATCGTCGT GCTCAACAAG GGCCACATCG AGCAGGCCGG CTCGCCGATG
GACCTGTACC GCGAGCCGGC CACGCCCTTC GTCGCCGGCT TCCTGGGCTC GCCCAACATG
AACCTGATCG AAGGCGCGCT GGCCCGCGAG ATGGGCTGCG AGGTCTACGG CATCCGCCCC
GAGCACCTCG ACATCAGCCG CGACAGCGGC CGCTGGCCGG CCACCGTGCA CCACATCGAA
CACCTGGGCG CCGACTGCAT CGTCTACGCC GACGTGCGTG GCGTCGGCAC GCTGACGGTG
CGCGCCGACG GCGAACAGCC CGGCCTGGCG GTCGGCCAGA CCATCCACCT GAGCCCGCGC
GCCGGCTTCG AGCACCGCTT CAGCGGCGGC CGGCGGGTGA ACTGA
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| Protein sequence | MHDVRLSAIR KSYTSGTTVI PGLDLEIPAG SFTVLVGPSG CGKSTLLRMV AGLESVSGGQ
ILIGGRDVTH LEPADRGIAM VFQSYALYPH MTVAENIGFP LTIARRPKAE IDAAVKKAAD
VLQLGPLLDR TPKALSGGQR QRVAIGRAIV RNPSVFLFDE PLSNLDASLR GQMRVELADL
HRKIGATMIY VTHDQVEAMT MADQIVVLNK GHIEQAGSPM DLYREPATPF VAGFLGSPNM
NLIEGALARE MGCEVYGIRP EHLDISRDSG RWPATVHHIE HLGADCIVYA DVRGVGTLTV
RADGEQPGLA VGQTIHLSPR AGFEHRFSGG RRVN
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