| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3288 |
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| Symbol | |
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| ID | 6162427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3651584 |
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| End bp | 3652861 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666063 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001792311 |
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| Protein GI | 171059962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.325402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAA GCCGCACACA CAACCCCGAC CGCCCCGCCG CGATGGTGAT CGTCGGCGCC
GGCCACGTCG GCGGGCGCGC CGCCCAGCAC CTGCGCGAGC AGGGCTGGGC CGGCGAGATC
GTGCTGATCG GCGCCGAGCC GGTGCTGCCC TACGAGCGCC CGCCGCTGTC GAAAGCCGTG
CTCAAGGGCG AGATGACGCC CGGACAATGC GCGCTGCGCG CCGCCGCCGA TTACGACCGC
GACCGCATCA CGCACATCGT CGCGACGGTG CAGGCCGTCG ACACCGCTGC ACGCAGCGTC
ACGCTGGCCG ATGGCCGCGT GATCGCCTAC GCCGCGCTGC TGCTCGCCAC CGGCGGCGTC
GCACGCAAGC TCGACATCCC TGGCGCCACC CTGCCCGGCG TGTGCGAGCT GCGCACCCAG
GCCGACGCCA TCGCGCTGGC GCCCAGCCTG CAGGCCGGCG CACACCTGCT GCTGATCGGC
GGCGGTTTCA TCGGGCTGGA GGTGGCGGCG TCGGCGCGCT CGCGTGGCTG CGAGGTGACG
GTGATCGAAG GCGCGCCGCG GCTGCTCGGC CGCGCCGTGC CGGCCAGCAT CGGCGCGCAG
GTGCTGGCGC TGCACCGCAG CCAGGGTGTC GACGTGCGGC TGGGCAGCGG CCCGAGCGCA
TTCGTACAGC GCGCCGACGG CCGGCTCGAC GTGAGCCTGC AGGACGGCAG CACGCGGGTC
GCCGACACCG TCGTGGTCGG CATCGGCATC ACGCCGGCGA CCGAGCTGGC GCGGGCCGCC
GGCCTGGCGG TCGAGCGCGG CATCGTCGTC AACGCACAAC TCGCCACCAG CGCCGCGGGC
GTCTACGCCG CCGGCGACGT GGCCGAGTTC CCGAGCGCGT TCTCGGGTCA GCTGATCCGC
CAGGAAACCT GGCACAACGC CGAGACCCAG GCCCGCACCG CCGCCGTCAA CATGCTCGGC
GGCCACGAGG CCTACACGGT CACGCCGTGG TTCTGGTCGG ACCAGTACGA CTGGCAACTG
CAGGTCAGCG GCGAGCCGGC GCTGGCCGCG AGCAGCGTGG TGCGCACCTT GGGCGAGGGC
TCCGAAGCCG GCGAACTGCA TTTCTACCTC GACGCCGACG GCCGCCTGGT CGGCGCCAGC
GGCTGCGGCC CGACCCGCGT GGTGGCCAAG GAACTCAAGC TCGCCCGCAC GCTGGTCGAA
CGCGGCGCGC GGCCCACGGC AGCGCAACTG GCCGACCCGG GCGTCAAGCT CAAGGCGCTG
CTGTCGACGG CGGCCTGA
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| Protein sequence | MDASRTHNPD RPAAMVIVGA GHVGGRAAQH LREQGWAGEI VLIGAEPVLP YERPPLSKAV
LKGEMTPGQC ALRAAADYDR DRITHIVATV QAVDTAARSV TLADGRVIAY AALLLATGGV
ARKLDIPGAT LPGVCELRTQ ADAIALAPSL QAGAHLLLIG GGFIGLEVAA SARSRGCEVT
VIEGAPRLLG RAVPASIGAQ VLALHRSQGV DVRLGSGPSA FVQRADGRLD VSLQDGSTRV
ADTVVVGIGI TPATELARAA GLAVERGIVV NAQLATSAAG VYAAGDVAEF PSAFSGQLIR
QETWHNAETQ ARTAAVNMLG GHEAYTVTPW FWSDQYDWQL QVSGEPALAA SSVVRTLGEG
SEAGELHFYL DADGRLVGAS GCGPTRVVAK ELKLARTLVE RGARPTAAQL ADPGVKLKAL
LSTAA
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