| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3279 |
|---|
| Symbol | |
|---|
| ID | 6162583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3641192 |
|---|
| End bp | 3641470 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641666054 |
|---|
| Product | acylphosphatase |
|---|
| Protein accession | YP_001792302 |
|---|
| Protein GI | 171059953 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1254] Acylphosphatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000800863 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGA CTGTCCTGCG ACTCGAGATC CGCGGCGTGG TGCAGGGTGT CGGCTACCGG
TGGTCGATGG TCGAGGAGGC CCGAAGGCTG GGCGTATGCG GCTGGGTGCG CAATCGTCGC
GACGGATCGG TCGAGGCGAT GGTGGCAGGC CCGGCGGAAG CGGTCGATCG GATCGTCGAA
TGGGCACGTC ACGGCCCGAC CTCAGCGGTG GTTTCGGGAC TCGATGTCAT GGCCGGCGAG
GGCCGTTTCA GCTCGTTCGA TCCATGGCCG ACGCAATAG
|
|---|
| Protein sequence | MAETVLRLEI RGVVQGVGYR WSMVEEARRL GVCGWVRNRR DGSVEAMVAG PAEAVDRIVE
WARHGPTSAV VSGLDVMAGE GRFSSFDPWP TQ
|
|---|
| |