Gene Lcho_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3277 
SymbolrplU 
ID6162912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3639396 
End bp3639707 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID641666051 
Product50S ribosomal protein L21 
Protein accessionYP_001792300 
Protein GI171059951 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00049339 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGCGG TCATAAAAAC CGGTGGCAAG CAATACAAGG TTGCTGCTGG CGAAAAAATT 
AAAGTAGAAC AGATTGCTGC GGAAGTTGGC CAAGAGATCG TGATCGACCA GGTTCTCGCG
CTCGGAAGCG GCGCGGATCT GAAAATCGGC ACGCCCTTGG TTGAAGGCGC AACTGTAACG
GCCACTGTGT TGGCGCAAGG CAGGCACGAC AAGGTCCGCA TCTTCAAGAT GCGCCGTCGC
AAGCACTACC AAAAGCGGCA AGGTCACCGC CAGAACTTCA CCGAGCTGCA AATCAGCGCG
GTGCTGGGCT GA
 
Protein sequence
MYAVIKTGGK QYKVAAGEKI KVEQIAAEVG QEIVIDQVLA LGSGADLKIG TPLVEGATVT 
ATVLAQGRHD KVRIFKMRRR KHYQKRQGHR QNFTELQISA VLG