Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3268 |
Symbol | |
ID | 6163611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3627851 |
End bp | 3628924 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641666042 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_001792291 |
Protein GI | 171059942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0164152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC CGTCGCCTCA ATCCAATCCG TCGCCCGCCT ACACCCGCGG CGCCCAGTTG CCCGCCTTGC TGCAGCAACG CATCCTGGTG CTCGACGGCG CGATGGGCAC GATGGTGCAG CGCTACAAGC TCGACGAGGC GGCGTTCCGC GGCGAGCGCT TCGCTGATCA CCCGAGCGAC CTCAAGGGCA ACAACGACCT GCTGGTGCTG ACGCGCCCGG ACGTGATCGC CGAGATCCAC GACCAGTACC TGGCCGCCGG CGCCGACATC ATCGAGACCA ACACCTTCGG CGCCACCTTC GTGGCGCAGG ACGACTACCA GCTCGGCGAA CTGGCCTACG AGATGAACCT CGTGGCCGCA CGGCTGGCGC GGCAATGCTG CGATCGCTAC AGCACGCCCG ACAAGCCGCG CTTCGTGGCC GGCGCGCTGG GCCCGACGCC GCGCACCGCC AGCATCAGCC CCGACGTCAA CGACGCCGGT GCGCGCAACA CCGACTTCGA CCAGCTGCAC GCCGCCTACA AGGAACAGGC GCGCGGGCTG ATGGACGGCG GCTGCGACCT GTTCCTGGTC GAGACCATCT TCGACACGCT CAACGCCAAG GCGGCGATCT TCGCGCTCGA CGAGCTGATG GAAGAAACCG GCGAGCGCCT GCCGGTGATC ATCTCGGGCA CCGTGACCGA CGCGTCGGGC CGCATCCTGT CGGGCCAGAC GGTCGGCGCG TTCTGGCACA GCGTGCGGCA TGCCAAGCCG ATCGCGATCG GCCTGAACTG CGCGCTCGGC GCCACGCTGA TGCGCCCCTA CATCGAGGAG CTGGCCAAGA TCGCCGGCGA GACCTTCGTG TCGTGTTACC CGAACGCCGG CCTGCCCAAC CCGATGAGCG ACACCGGTTT CGACGAGACG CCGGAGGTGA CCGGCGCGCT GATCGAGGAG TTCGCGAAAG CCGGCTTCCT CAACATCGCC GGCGGCTGCT GCGGCACCAC GCCCGCGCAC ATCGCCGAGA TTGCGCAACG CGTGGGCCGC TACCAGCCGC GCTGCCGGCA CACGGCGCCG TTCAGCGATC TGCTGGCGGC CTGA
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Protein sequence | MNTPSPQSNP SPAYTRGAQL PALLQQRILV LDGAMGTMVQ RYKLDEAAFR GERFADHPSD LKGNNDLLVL TRPDVIAEIH DQYLAAGADI IETNTFGATF VAQDDYQLGE LAYEMNLVAA RLARQCCDRY STPDKPRFVA GALGPTPRTA SISPDVNDAG ARNTDFDQLH AAYKEQARGL MDGGCDLFLV ETIFDTLNAK AAIFALDELM EETGERLPVI ISGTVTDASG RILSGQTVGA FWHSVRHAKP IAIGLNCALG ATLMRPYIEE LAKIAGETFV SCYPNAGLPN PMSDTGFDET PEVTGALIEE FAKAGFLNIA GGCCGTTPAH IAEIAQRVGR YQPRCRHTAP FSDLLAA
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