Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3267 |
Symbol | |
ID | 6163610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3625419 |
End bp | 3627806 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666041 |
Product | ATPase central domain-containing protein |
Protein accession | YP_001792290 |
Protein GI | 171059941 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.115516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAT TGGGGCCCAG ATCAACAGCC GGCCAGACCG CCGACACCAC GCCGGATGCG ACCGCCGCGC GCCGCGTCGC CAGGCTCGCG GCCACCCGCG GCACGCGGCC GGTGGTGTCA CCCGCCCTGC ACGCCGCGCC GGTGCTCGAC CTGCTGTGCT CGCACTTCGT GCTGACCCTG ACGCTGCGCC ACGCGCCGCG TTTCACCGGC CGGCGCGACT GGAACAGCCT GCTCGCGCTG ACCGCCCGCC ACCTGGTCTG GCCCACCACC GTGCTGGCGC GGCTGCGCGA GTTTCTCGCC CGCCGCGTCA AGGGCCACGA CGGCTGGGCC CGCCACGAAC AGCTCGATGA CGCCGCCTTC CTGGCCAAGC ACGGCTGGTG GCACGGGCCG TATGACGAGT CGACGCTGTT CTTCTACCTC GACGACTACG TCAAGGACGC GCCCAAGGAC CTGATGTCGC TGCTCGGCTG CACCGCCGAG TGGCTGGGGC GCGAGCTGCG CGCCGCCTCG ACGCTGGTGC AGAAGAACGT CGACGTGCTT GGCGCGCTGC TGCAACTCAA CCCGGCCGAA CGCGCGCTGC TGCTCTACGG CACGCTGGCG CGTTACCAGC GCGACCTGCG CGGGCTGCTG GTCGAGTTCA AGGTCTCGAG CGCGCAGGAG GCCTACGCCA CGCTGGCCGA GGTGGCCGGG GTCGACGAAC GCGAGGTCGC CGAGGCGCTG CGCGCGGGCA GCCGGCTCGA ACGCGTGGGC ATGATCGAGA ACCTGATCTC CGAGCACAAC ATCACCGACC TCGCCGACCT GATGAAGGTG TCCGACCAGC TGCCGCCGGT GCTGATGCGC GAATACCGCG ACCCGCAGGA CCTGATGGCG GTGTTCACCC GGCCGTCGGT CAAGAGCGAG CTGGGCGCGG CCGATTTCGG CTACGTCGCC GAAGAGCTGC AGGTGCTGAC CACGCTGCTC GGCCAGGCGG TGCAGCGCCG CGAGGCGGGT GTCAACGTGC TGCTCTACGG CCCGCCCGGC ACCGGCAAGA CCGAGTTGGC GCGGGTGGCG GCGCAGGCCG CGGGGCTCGA TCTCTACGAG GTCGAATACG CCGACCGCGA CGGCAACTCG CTGTCCGGGC GCGACCGCTA CCGCTCGCTG CAGATCAGCC AGGTGTTCCT GAAGGCGAGC CCGCAGGTGG CGCTGCTGTT CGACGAGGTC GAGGACGTGT TCCCGCCGAT CTCGTCGGAC GCCGCCCAGC TGATCGCGCG GCTGGAGGCA GGCGAGAGCG GCGCCGGCCA TTCGGTCAAC GGCAAGGCCT GGGTGAACCA GATCCTGGAG ACCAACCCGG TGCCGGTGAT CTGGCTGACC AACCGCATCG AGCAGATCGA CCCGGCGTTC CGGCGCCGTT TCCAGTACCA CCTGGAGCTG AAATCGCCGC CGCCCGGCGC GCGCGAGGCG CTGGTGACGC GGGCACTCAG CGGCGCGGCC GTCAGCCCGG CGTTCTGCCA GCGGCTGGCC GAACGCCCGG CGCTGACACC GGCGCAGATC CGCACCGCCG TGCGGTTTGC GAGGCTGGTG GGTGCGCCCG AAGGCGATGA CGTCGAGGCG CTGATCGAGC GCCAGATCGC CCACGCCGAC CTCGCGCTGG GCAACCGGCC CGGCGCCAGC CGTGCGCAGC GGCCGGTGGT GACGCGCTAC GACCTCGGCC TGCTCAACAT CGAGAGCCGC TATCCGGTCG AGCGCATCGT CGAATCGCTG CGCCTGCGCG GCCACGGCGC GCTGTGTTTC TACGGCCCGC CGGGCACCGG CAAGACCGCG CTGGCCGAGC ACATCGCCGA GCAGCTGAAG CGGCCGCTGA TGATCCGCCA GGCCAGCGAC CTGATGAGCA AATACGTCGG CGAGACCGAG CAGGCGATGG CGCGCATGTT CGACGCCGCC GAACACGAAC AGGCGGTGCT GCTGCTCGAC GAGGCCGACA GCTTCTTGCG CAGCCGCCAG CGCGCCGAGC GCAACTACGA GGTCACCGAG GTGAACCAGA TGCTGCAGGG CATGGAGCGT TTCGGCGGCA TCTTCATCTG CACCACCAAC CTGTTCACCG AGCTCGACGA GGCGGCGCTG CGGCGCTTCA CCTTCAAGAT CGCCTTCCAG CCGCTGACCG CCGAGCAGCG TGTGCGCATG TATGTGGCCG AGGCGCTGGG CGGCGATGCC GGCGCGCTGA ACGCCGAGCG CAGCACGCGG CTGGCACATC TCGACCAGCT CGCCTGCGGC GACTTCGCGG CGGTGCAGCG CCAGGCCGAG ATCCTGGGCG CGGCGCTCGA TGCGGACGAG TTCCTGTCGC AGCTCGAAGC CGAACACCGC GTCAAGCCGC AGGTGCGCGA GCGGCGCGGC ATCGGCTTCC TGCGCTGA
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Protein sequence | MRRLGPRSTA GQTADTTPDA TAARRVARLA ATRGTRPVVS PALHAAPVLD LLCSHFVLTL TLRHAPRFTG RRDWNSLLAL TARHLVWPTT VLARLREFLA RRVKGHDGWA RHEQLDDAAF LAKHGWWHGP YDESTLFFYL DDYVKDAPKD LMSLLGCTAE WLGRELRAAS TLVQKNVDVL GALLQLNPAE RALLLYGTLA RYQRDLRGLL VEFKVSSAQE AYATLAEVAG VDEREVAEAL RAGSRLERVG MIENLISEHN ITDLADLMKV SDQLPPVLMR EYRDPQDLMA VFTRPSVKSE LGAADFGYVA EELQVLTTLL GQAVQRREAG VNVLLYGPPG TGKTELARVA AQAAGLDLYE VEYADRDGNS LSGRDRYRSL QISQVFLKAS PQVALLFDEV EDVFPPISSD AAQLIARLEA GESGAGHSVN GKAWVNQILE TNPVPVIWLT NRIEQIDPAF RRRFQYHLEL KSPPPGAREA LVTRALSGAA VSPAFCQRLA ERPALTPAQI RTAVRFARLV GAPEGDDVEA LIERQIAHAD LALGNRPGAS RAQRPVVTRY DLGLLNIESR YPVERIVESL RLRGHGALCF YGPPGTGKTA LAEHIAEQLK RPLMIRQASD LMSKYVGETE QAMARMFDAA EHEQAVLLLD EADSFLRSRQ RAERNYEVTE VNQMLQGMER FGGIFICTTN LFTELDEAAL RRFTFKIAFQ PLTAEQRVRM YVAEALGGDA GALNAERSTR LAHLDQLACG DFAAVQRQAE ILGAALDADE FLSQLEAEHR VKPQVRERRG IGFLR
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