Gene Lcho_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3259 
Symbol 
ID6163698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3616599 
End bp3617729 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content74% 
IMG OID641666033 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001792282 
Protein GI171059933 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.809421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG CGTTGAACAG CCTGGTCGAG CGCGTGCGCG CCGCCAGGGA CACGAGCAGC 
CCGCTGGCGA TCCGCGGCGC TGGCACCAAG GCGTTTTACG GCGAGGCCAT CACCGGCAGC 
GTGCTCGACA CGCGTGACCT GACCGGCATC AGCAGCTACG AGCCCAGCGA GCTGGTGCTG 
ACCGCGCGCG CGGGCACGCC GCTGGCCGAG GTCGAGGCCG CACTCGCCGA GCGCGGCCAG 
TGCCTGCCGT TCGAGCCGCC GCGTTTTCCA GATCCCGAGC GGCCCGGCCA GCGCGGCGGC 
ACGATCGGCG GCGTGGTGGC TTCGGGCCTG GCCGGCCCGG CGCGGGCCAG TGCCGGCGGC 
GTGCGCGACT ACGTGCTCGG CGCCACCTTG CTCAACGGCG AGGGCGAGGT GCTGAGCTTC 
GGCGGCCAGG TGATGAAGAA CGTCGCCGGC TACGACGTGT CGCGCCTGCT GGCCGGCTCG 
CTGGGCGTGC TGGGCGTGAT CTGCGAGGTC TCGCTCAAGG TGCTGCCGGT GCCGCCGGCC 
ACCACCACGC TGCGCTTCGA CTGCGAGCAG GCCCGCGCCC TCGACCTGCT GCAGACCTGG 
GGCGGCCAGC CGCTGCCGCT CAACGCCAGC GCCTGGTGGC AGGGCGCGCT GATCGTGCGG 
CTGTCGGGCG CGGTGGCGGC GGTCGAATCG GCCAGCCACA CGCTCGGCGG CGAGGTCATC 
GACGCGCGCC TGGCGCAGGG CTTCTGGGCC GGCCTGCGCG ACCAGACCGA CGAGTTCTTC 
AACGACGCCC GCCGCGCGCT GGCCGACGGT GCCGCGCTCT GGCGCGTCAG CGTGCCGGCC 
GGTTCGCCGC CGCTGGCGCT GCAGGGCGAG CAGCTGATCG AGTGGGGCGG CGCGCAGCGC 
TGGTGGGTCA GCCGCGACGG CGTCGCCCGC GTGCGCCAGG TGGCGGCCCA GCATGGCGGC 
CATGCCACGC TCTACCGCGC CAAGGACAAG GCCGCGGTGC TGGCCGGCGC CACAGCGGCC 
AGCGTGTTCG AGCCGCTCAA GGCGCCGCTC GACCGCATCC ACCGCGACCT GAAAAAGAGC 
TTCGACCCGC ATGGCCTCTT CAATCCGGGC CGGCTTTACC CCCATCTGTG A
 
Protein sequence
MSKALNSLVE RVRAARDTSS PLAIRGAGTK AFYGEAITGS VLDTRDLTGI SSYEPSELVL 
TARAGTPLAE VEAALAERGQ CLPFEPPRFP DPERPGQRGG TIGGVVASGL AGPARASAGG 
VRDYVLGATL LNGEGEVLSF GGQVMKNVAG YDVSRLLAGS LGVLGVICEV SLKVLPVPPA 
TTTLRFDCEQ ARALDLLQTW GGQPLPLNAS AWWQGALIVR LSGAVAAVES ASHTLGGEVI 
DARLAQGFWA GLRDQTDEFF NDARRALADG AALWRVSVPA GSPPLALQGE QLIEWGGAQR 
WWVSRDGVAR VRQVAAQHGG HATLYRAKDK AAVLAGATAA SVFEPLKAPL DRIHRDLKKS 
FDPHGLFNPG RLYPHL