| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3244 |
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| Symbol | |
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| ID | 6160865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3598175 |
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| End bp | 3599347 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666018 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792267 |
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| Protein GI | 171059918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA TCGAACTGAA ATCCGTCTTC AAGGCCTACG GCGACAACCC GCCGGTGATC
CGCGACGTGA ACCTCAACAT CCCGCAAGGC GAGTTCTGCG TCTTCGTGGG GCCCTCGGGC
TGCGGCAAGT CGACCCTGCT GCGCATGATC GCGGGCCTGG AGGAGATCAG CGGCGGCGAG
CTGCGCATCG GCGGCGCGCT GATGAACGAC GTGCCGCCCG CGCACCGCGG GGTGGCGATG
GTGTTCCAGA CCTACGCGCT GTTCCCGCAC ATGTCGGTCT ACGAGAACAT GGCCTTCGGC
CTCGGCCTGG CGAAGGTGGA CAAGAAGATC ATCGACGAGA AGGTGCGCGC CGCGGCCAAG
GTGCTGCAGC TCGACGCGCT GCTCGACCGC AAGCCCAAGG CGCTGTCGGG CGGCCAGCGC
CAGCGGGTGG CGATCGGCCG CGCCATCGTG CGCGAGCCGG GCGTCTTCCT GTTCGACGAG
CCGCTGTCGA ACCTGGATGC CGCACTGCGC GTGCAGACCC GCTTCGAGAT CGCCAAGCTG
CACCGCGACT TCGGCCGCGC ATCCACCGTC TACGTAACCC ACGACCAGGT CGAGGCGATG
ACGCTGGCCG ACCGCATCCT GCTGCTCAAC AGCGGCGAGG CGGTGCAGCG CGACGGCAGC
GTGGCGCAGT GCGGCTCGCC GCTGGAGCTC TATCACCGGC CGAACAACCT GTTCGTGGCC
GGCTTCATCG GCAGCCCCAA GATGAACTTC CTGCGCGGCA AGCTGCGCAG CGCCACGCCC
GATCAGGCCA CCATCGAGCT GCACAGCGGC GAGGTGCTGC AGGCCGCCGT CGACGCACGC
CGCCTGCAGA GCGGTGCGCC CGTCACGCTG GGCATCCGCC CCGAAGACAC CCGCCTGGGC
ACCGACGAGC AGCACATCGT GCGGCCGGTG CAGTGGCAGG AGCGGCTGGG CGAGTCGACC
TACCTCTACC TCGACGGTGG TGACGCCGAA CACAGCCTGG CCACCGGCGG CGACGCGCTG
GTCGCCAAGG CACCGGGCCA TGTGCACGCG GTGTCGGGCC ACCGACTGGC GATGGCGATA
CCCGCCCGCT CGGCCCACCT GTTCGACGAA CACGGCCGCG CACTCGAACG GCTGATCCCC
GACACCGACC TGCTGCTGCC CGAAGCGGCC TGA
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| Protein sequence | MASIELKSVF KAYGDNPPVI RDVNLNIPQG EFCVFVGPSG CGKSTLLRMI AGLEEISGGE
LRIGGALMND VPPAHRGVAM VFQTYALFPH MSVYENMAFG LGLAKVDKKI IDEKVRAAAK
VLQLDALLDR KPKALSGGQR QRVAIGRAIV REPGVFLFDE PLSNLDAALR VQTRFEIAKL
HRDFGRASTV YVTHDQVEAM TLADRILLLN SGEAVQRDGS VAQCGSPLEL YHRPNNLFVA
GFIGSPKMNF LRGKLRSATP DQATIELHSG EVLQAAVDAR RLQSGAPVTL GIRPEDTRLG
TDEQHIVRPV QWQERLGEST YLYLDGGDAE HSLATGGDAL VAKAPGHVHA VSGHRLAMAI
PARSAHLFDE HGRALERLIP DTDLLLPEAA
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