| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3241 |
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| Symbol | |
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| ID | 6161674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3594716 |
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| End bp | 3595642 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666015 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792264 |
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| Protein GI | 171059915 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG CCCTTCCCAC CGCCGTCGTG CCCAGCGCCT CGGTGCGCGC ACGCCGCGTC
TCGTCCTCGC GCCTGCTGGC CTGGGCCATC CTCGGCCTGA TGCTGTTCGT CACGGTGGCG
CCGCTGTGGC TGGTGCTCAA GACCGCGCTC ACGCCATCGG CCGACCTGTT CACGCAGAGC
GCGCAGCTGA TGCCGGATCA GCCGACGCTG GCGCACTTCC AGCGCGTGCT CGGGCTGCTG
AGCCCCGAGC AGGCGATGGC GCACGGCGGC TCGGGCGCCG AGATCCATTT CATGCGCGCG
CTGACCAACT CGCTGCTGTT CACCGCCATC GTCGTGGTCT GCCAGGTGCT CACCAGCGCG
ATGGCCGCCT ATGCCTTCGC CCGCTTGCGC TTCCCCGGCC GCGACGTGCT GTTCGGGCTG
TTCGTCGCAT CGATGATGAT CCCGGGCGTC GTCACCTTCA TCCCCAACTT CATCCTGATC
AAGGACCTGG GCTGGCTCAA CACGCTGGCC GGCATGGTGG CGCCGTTCTG CCTGTTCTCG
GCCTTCGGCA TCTTCTTCCT GCGCCAGTTC TTCATGTCGG TGCCGCGTGA CCTCGAAGAG
GCCGCGATGC TCGAAGGTGC CTCGCCGCTG CGCATCTTCT GGACCGTGGT GCTGCCGCTG
GCGGCCACGC CGATCGCCAC CATCGCGATC CTGCAGGGCA TCAACATGTG GAACGAGTTC
TTCTGGCCCT TCCTGGTCGC CAAGGACGAG GAGATGCAGG TGCTGACCGT GGCGCTGCAG
AGCTTCAAGT CGCAGACCCC GCAAGGCCAG CCCGACTGGA CCGGCCTGAT GGCGGCCACC
GCGCTGACCA TCCTGCCGAC GCTGGCGCTG CTGGTGATCT TCGGCCGCCG CGTTGTCGAG
TCCGTGCAGT TCAGCGGCAG CAAGTGA
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| Protein sequence | MSAALPTAVV PSASVRARRV SSSRLLAWAI LGLMLFVTVA PLWLVLKTAL TPSADLFTQS
AQLMPDQPTL AHFQRVLGLL SPEQAMAHGG SGAEIHFMRA LTNSLLFTAI VVVCQVLTSA
MAAYAFARLR FPGRDVLFGL FVASMMIPGV VTFIPNFILI KDLGWLNTLA GMVAPFCLFS
AFGIFFLRQF FMSVPRDLEE AAMLEGASPL RIFWTVVLPL AATPIATIAI LQGINMWNEF
FWPFLVAKDE EMQVLTVALQ SFKSQTPQGQ PDWTGLMAAT ALTILPTLAL LVIFGRRVVE
SVQFSGSK
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