| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3239 |
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| Symbol | |
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| ID | 6161672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3591795 |
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| End bp | 3593219 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666013 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001792262 |
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| Protein GI | 171059913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATG CCTCCCCGCG CCGACTGAAG ATCACCCTGA TCGGTGCCGG CAGCACCGTC
TTCACCCGCA ACCTGCTGGG TGACATGCTC AGCCATCCCG AGCTCGCGGG CGCCGAGATC
GCGCTGCACG ACATCGACGA ACACCGCCTG CGGCTGTCCG AAAAGGTGGC CTACCGCATC
GCCGACGCGG TGGGCGCCAA GCCGGTGATC ACCGCCAGCA CCGACCGCCG CCGCGCGCTC
GACGGCGCGC GCTTCGTGCT CAACACCATC CAGGTCGGCG GCTACAAGCC GGCCACCGTG
ACCGACTTCG ACATCCCCAA GAAATACGGC CTCGAACAGA CCATCGGCGA CACGCTGGGC
ATCGGCGGCA TCATGCGCGG CCTGCGCACG ATCCCCGTGC AGTTGGCGAT GCTGCGCGAC
ATGGACGAGC TGTGCGCGCC CGGCGCCGTG CACCTCAACT ACGTCAACCC GATGGCGATG
ATCACGTGGG CGCTCAACCG CGCCTCGACG CGCGTGCCCA CCGTCGGCCT GTGCCACAGC
GTGCAGCACA CCGCGCAGGA GCTGGCCAAC GACTTGGGGC TGCCGGTCGA CGAGATCCAG
TACCACTGCG CCGGCATCAA CCACATGTCG TTCTACCTGC GCTTCGAGCG CAACGGCGAG
GACCTGTACC CCAAGCTGCG CGACATCCAG CGCGAGGGCC GCATGCCGGC CTGGAACCGC
GTGCGCTACG AGATGCTGCG TCAGCTGGGG CACTTTCCGA CCGAGTCGAG CGAGCACTTT
GCCGAGTACG TGCCGTGGTT CATCAAGCAG GGCCGCGAGG AGCTGCTGCG CAAGTTCAAC
ATCCCGCTCG ACGAGTACCC GGGCCGCTGC CAGGTGTTCG AACACGCCTG GCCCTACATC
GAGCGTGAGC TCGAAGTGCC CGGCTCGCAG GATCCGGCCG CGCTGCTGGC GCAGCTGCGC
GCCGCCGACA TCCACGTCAT GCAGCGCGAG ATCGAAGGCG CGCCGCAGAT GCTCGAAGGC
CTGCGCTCGG TCAAGCGCAG CGTCGAATAC GGCAGCGCGA TCATCCATTC GATCGTGACC
GGCCAGCCGC GCGTGATCAA CGGCAACGTG CTCAACCACC AGCTGATCGA CAACCTGCCG
CAAGGCTGTG CGATCGAGGT GCCGTGCCTG GTCGACCACA ACGGCGTGCA GCCCACGCGC
GTGGGCAAAC TGCCCGTGCA CTTGGCGGCG CTGATGCGCA CCAACGTCAA CGTGCAGGAG
ATGGTGGTGG AGTCGGTGCT CGAACAGCGG CGCGACCACG TCTACCATGC GGCGATGCTC
GACCCGCACA CCGCCGCCAC GCTCGATCTG GATCAGATCC GCGCGATGGT CGACGAGCTG
CTGGCGGCGC ACCGGCCCTT CCTGCCCGAG TACCTGCACG GCTGA
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| Protein sequence | MRDASPRRLK ITLIGAGSTV FTRNLLGDML SHPELAGAEI ALHDIDEHRL RLSEKVAYRI
ADAVGAKPVI TASTDRRRAL DGARFVLNTI QVGGYKPATV TDFDIPKKYG LEQTIGDTLG
IGGIMRGLRT IPVQLAMLRD MDELCAPGAV HLNYVNPMAM ITWALNRAST RVPTVGLCHS
VQHTAQELAN DLGLPVDEIQ YHCAGINHMS FYLRFERNGE DLYPKLRDIQ REGRMPAWNR
VRYEMLRQLG HFPTESSEHF AEYVPWFIKQ GREELLRKFN IPLDEYPGRC QVFEHAWPYI
ERELEVPGSQ DPAALLAQLR AADIHVMQRE IEGAPQMLEG LRSVKRSVEY GSAIIHSIVT
GQPRVINGNV LNHQLIDNLP QGCAIEVPCL VDHNGVQPTR VGKLPVHLAA LMRTNVNVQE
MVVESVLEQR RDHVYHAAML DPHTAATLDL DQIRAMVDEL LAAHRPFLPE YLHG
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