| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3230 |
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| Symbol | |
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| ID | 6162745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3583882 |
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| End bp | 3585087 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666004 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001792253 |
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| Protein GI | 171059904 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCGAAGCCTT TCTCGTCGCG ATGACCGTGG TCTTTGCGCT GCCCTACCTG
GTCTGGCGCC TGGCCGACAT CGATGCCTGG GCGCCGCTGG TGGTGGTGCA GATCCTAGCC
GGCATCGCGC TCGGTCCCGG TGTACTCGGC CAGTGGTGGC CGGATCTGCA TGCCGTCGTG
TTCACGCCGC CGGTGATCCA GGCGCTCAAC GGTGTGGCCT GGTGGGCGGT CATGCTGTTC
GTCTTCATCG CCGGGATCGA ACTGGACCTG GGCGCGGCCT GGCGGCATCG CCGTGAGACC
GGCACGACCG CGGCGTTGGC GCTGGGTGTG CCGCTGCTCG CCGGTGGCGT GGCGGCCTGC
GGAGGGCTGA TGACCAGCGG CTGGATCGGG CCGGCCGCGC TGCCCTGGCA GTTCGTCGTC
GGCGTGGGCA TGGCCTGCGC GGTGACGGCG CTGCCCATCC TGGTGCTGTT CCTCGAGCGC
CTGAGCCTGC TGCGTGAGCC AATGGGGCAG CGCATCCTGC GTTATGCCAG CCTCGACGAC
ATCCTGATCT GGGCGGTGAT GGCGCTGATC CTGATGGACT GGCAGCGCAT GGGCCACCAG
GCCGCTTTCC TTCTGGGCTT CGGCCTGCTC GCCTGGGCCA TGCGCGTGCT GATGCGGTGC
GTTGCCGAAC AAGACCGCTG GTACCTCGCG CCGGTCTGGC TGGCGGTCTG CGCTCTTGCG
GCCGACTGGG CCGGCCTGCA CTACATGGTC GGCGCCTTCC TGGCCGGCGC GGTGCTCGAT
GCCGATCTGT TCGACCGTGC GGCGATGGAC ACGCTGCGCC ACCATGTGCT GATGCTGCTG
ATGCCGGTCT TCTTCCTGTC CACCGGCCTG CGCACGCATT GGTCGGTACA GGGCGCCGAC
GTGCTGATCG CCGCGCTGGT GCTGCTGGTG GCTTCGGTGG GCGGCAAGCT GCTGGGTGTG
CGCCTGGCCG GCCATGTGCT CGGCTGGAGC AGCGCCGAGG CCAGGCTGGT GGGCTGGCTG
CTGCAGACCA AGGCGCTGAT CATGATCATC TTCGCCAACA TCCTGCTCGA CCGCCAGGTG
ATCACCGCAG ATGCCTTCAC CGCGCTGCTG CTGATGGCCG TGGGCAGCAC GATGCTGACG
GTACCGATGG CTGCCCCGCT GCTGGCGCGC CTGCGCGGCA GGCTCGGCTC TGCGCTGTGG
ACATGA
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| Protein sequence | MNTAEAFLVA MTVVFALPYL VWRLADIDAW APLVVVQILA GIALGPGVLG QWWPDLHAVV
FTPPVIQALN GVAWWAVMLF VFIAGIELDL GAAWRHRRET GTTAALALGV PLLAGGVAAC
GGLMTSGWIG PAALPWQFVV GVGMACAVTA LPILVLFLER LSLLREPMGQ RILRYASLDD
ILIWAVMALI LMDWQRMGHQ AAFLLGFGLL AWAMRVLMRC VAEQDRWYLA PVWLAVCALA
ADWAGLHYMV GAFLAGAVLD ADLFDRAAMD TLRHHVLMLL MPVFFLSTGL RTHWSVQGAD
VLIAALVLLV ASVGGKLLGV RLAGHVLGWS SAEARLVGWL LQTKALIMII FANILLDRQV
ITADAFTALL LMAVGSTMLT VPMAAPLLAR LRGRLGSALW T
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