| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3222 |
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| Symbol | |
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| ID | 6161980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3572502 |
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| End bp | 3573275 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665996 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001792245 |
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| Protein GI | 171059896 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTCA TCCCCAATCC GAGACAGGCC GGCGTGCTCG ACGCCGTGCG AGAACAAGGC
ACGATCAGCG TCGAGGCGCT GGCCGAGCGC TTCGGCGTGA CGCTGCAGAC CGTGCGGCGC
GACGTCAAGC TGCTCTCCGG CGCCGGGCTG CTGACGCGCT TCCACGGCGG CGTGCGGCTG
CCGAGTTCGA CCACCGAGAA CATCGCCTAC CGCCAGCGCC AGCAGCTCAA CGAGGACGCC
AAGCACCGCA TCGCCCGGGC AGTGGCCGAT GCGGTGCCCG ACGGCTGTTC GCTGATCATC
AACATCGGTA CCACCACCGA GGCGATCGCG CACGAGCTGC TGCGCCGCCG CGGCCTGCGC
GTGATCACCA ACAACCTCAA TGTCGCGGCG ATCCTGTCCG ACAACCCCGA CTGCGAAGTC
ATCGTCGCCG GGGGTCTGGT GCGTTCGCGC GACCGCGGCG TGGTGGGCGA GGCGACCGTC
GAGTTCATCC GCCAGTTCAA GGTCGACATC GCCCTGATCG GCATCTCGGG CATCGAGGCC
GACGGCACGC TGCGCGATTT CGACTACCGC GAGGTGACGG TGGCGCGCGC CATCGTCGAG
CACTCGCGCG AGGTCTGGCT GGCGGCCGAC CACAGCAAGT TCAACCGCCC GGCGATGGTG
GAGCTGGCGC GCCTCGACCA GGTCGATGTG CTGTACACCG ACCAGCCGCC GCCGCCGCCC
TTCGACGCCT TGCTCGACGA GGCAGGCGTG CGCTGCGTGG TGGCCCCGGC CTGA
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| Protein sequence | MNFIPNPRQA GVLDAVREQG TISVEALAER FGVTLQTVRR DVKLLSGAGL LTRFHGGVRL
PSSTTENIAY RQRQQLNEDA KHRIARAVAD AVPDGCSLII NIGTTTEAIA HELLRRRGLR
VITNNLNVAA ILSDNPDCEV IVAGGLVRSR DRGVVGEATV EFIRQFKVDI ALIGISGIEA
DGTLRDFDYR EVTVARAIVE HSREVWLAAD HSKFNRPAMV ELARLDQVDV LYTDQPPPPP
FDALLDEAGV RCVVAPA
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