| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3215 |
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| Symbol | |
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| ID | 6161457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3561606 |
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| End bp | 3563336 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665989 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792238 |
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| Protein GI | 171059889 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTC CTGCTTTCCC CCTTGCCCGC ACGGTGCTCG CGAGCGCACT TCTGTCGGCC
GGTCTGCTCG GCACCGCCTG CGGCGGCGGC GATCCGGTGG CCGTGCCCGA GGCCACGCCC
ACCTCGCTGA GCCTGGCCAG GATCGGCGGC TATGCCGATG CCAGCCTGAC GAACCCGGTC
GGCGCGGCGG AGATCACCGC GTTCGACGCC GCCAGCAAGC GCCTGTTCGT CGTCAACAGC
GTGCTGGCCA CGGTCGACGT GCTCGACCTG GCCAACCCGG CCGCACCGGT CAAGCTCGCC
AGCATCGACA TCAGCGCGTT GGGTGCGTCG GTCAACAGCG TGGCGGTCAG CAACGGGTTG
GTGGCACTGG CGATCGAAGC CAATCCCAAG ACCGCACCCG GCGTGGTGGC GTTCTACAAC
GCCAGCAACC TCGCGCTGCT GGGCCAGGTC ACGGTGGGCG CCTTGCCCGA CATGCTGACC
TTCACCCCCG ACGGCCAGAC CGTGGTGGTG GCCAACGAGG GCGAGCCCGC CAACTACGCC
GTGGCCGCCA CCGCGACCAC ACCCGCCATC GCGGCCGACG ACCCCGAAGG CTCGATCAGC
GTCATCAGCG TGACGCGCAC CGGCAGCGCG AGCACGCTGG CCGTCACGCT GAGTGCCCGC
ACGGCCGACT TCAGCGCCTA CAACAGCCAG CTCGCCGAAC TGCGCGCGCT GGGCGTGCGC
ATCTACGGGC CCGGTGCCAC GGTGGCGCAG GACCTCGAAC CCGAGTACGT CACGATCTCG
GCCGATGGCC GCACCGCCTA CGTGACGCTG CAGGAGAACA ACGCGATCGC CACGGTGGAC
ATCGCCAGCG CCACCGTCAC CGCGATCCGC CCGCTCGGCA CCAAGGATCA CGGCGTGGCC
GGTTTCGGTC TCGACCCGAG CGATGAAGAC GGCGGCACCA ACACCAATTC GGGCACGCCG
GCCGTCCAGA TCGGCACCTG GCCGGTGCGC GGCATGTACC TGCCCGACGC CATCGCCAGC
TACAGCGTGG GCGGCCAGAC CTACCTGATC ACCGCCAACG AGGGCGATGC CCGCGCCGAC
TGGCCGGGCC TGAACGAGGA GGTGCGCATT CGCGCCCATT GCAGCGCCGG CCTCGACCCG
GCGGTGTTTG CCGGCGCCAC CGGCCTGGCA GCCGATCCGC TGCTCAACGA CTCCAACCTC
GGCCGCCTGC GTGTCACCAG CCTGCCCAAC GGCAACGACA CCGGCAAGAA CGCCGCCGGC
CAGTGCAACA AGCTGCATGC CTTCGGCGCG CGCTCGTTCT CGATCTGGGC CACCGGCGGT
ACCGGCGCCA TGACCCGTGT CTACGACTCG GGCGACGAGT TCGAGCAGCG CACCGTGGCG
CTGCCGAACG TGCTCTTCAA TGCCAGCCAC GATGCCAATA CGCTCGACGG CCGCAGCGCC
TCCAAGGGCC CCGAGCCCGA GTCGGTGACC ACGGCCAAGT TCGGCAACAA GACCTATGCC
TTCATCGGGC TGGAGCGGGT GGGCGGGCTG ATGGTCTATG ACGTCACCAC GCCGACGGCA
CCGAGCTACG TCACCTACCT CAACAGCCGC GACGCCACCA CCGGCGACCG CGGCCCCGAG
GGCCTGGTGT TCGTGCCGGC GGCGCAGTCT CCCAACGGCA AGCCGCTGCT GATCGTGGGC
AACGAGGTCA GTGGCAGCAC CGCGGTGCTG CAGGTCAACC TGGCGTATTG A
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| Protein sequence | MRIPAFPLAR TVLASALLSA GLLGTACGGG DPVAVPEATP TSLSLARIGG YADASLTNPV
GAAEITAFDA ASKRLFVVNS VLATVDVLDL ANPAAPVKLA SIDISALGAS VNSVAVSNGL
VALAIEANPK TAPGVVAFYN ASNLALLGQV TVGALPDMLT FTPDGQTVVV ANEGEPANYA
VAATATTPAI AADDPEGSIS VISVTRTGSA STLAVTLSAR TADFSAYNSQ LAELRALGVR
IYGPGATVAQ DLEPEYVTIS ADGRTAYVTL QENNAIATVD IASATVTAIR PLGTKDHGVA
GFGLDPSDED GGTNTNSGTP AVQIGTWPVR GMYLPDAIAS YSVGGQTYLI TANEGDARAD
WPGLNEEVRI RAHCSAGLDP AVFAGATGLA ADPLLNDSNL GRLRVTSLPN GNDTGKNAAG
QCNKLHAFGA RSFSIWATGG TGAMTRVYDS GDEFEQRTVA LPNVLFNASH DANTLDGRSA
SKGPEPESVT TAKFGNKTYA FIGLERVGGL MVYDVTTPTA PSYVTYLNSR DATTGDRGPE
GLVFVPAAQS PNGKPLLIVG NEVSGSTAVL QVNLAY
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