| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3213 |
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| Symbol | |
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| ID | 6161614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3557476 |
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| End bp | 3559293 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665987 |
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| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
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| Protein accession | YP_001792236 |
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| Protein GI | 171059887 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGACC TGCTCACGCA AGACCTGACC GCCGTGTCGG CCGGTCGAGC CGGTGCCCGC
GAGCCCGGTG GCAGTCCGTG GCTCGGCCGT CGCAGCCCGC CGTCGGACTC GTTCGTCCGC
TACCAGGCGG TCGAGCGGGC GCTGCAGTCG ATGCTGCCGG CGCAGGCATC GTCGTCGGTG
GCGCCGGCCA CGTCGCTGGG CGCGTTCAAC GACTGGGCCT TGCACCTGAT GACCTCGCCG
GCCAAGCAGT GGGAGCTGAT GCAGCTGGCC GCCGAGCAGG CCTCGCAATG GTGGTGCGCG
GTGGCCGCCA GCCCCGCCAG CATGGGCCGC GGGCCGTGGT GCATCGAGCC CTTGCCGCAG
GACAGGCGCT TCGACGATCC GGCCTGGCGC ATGCCGCCGT TCGCGCTGAT CGCGCAGCTG
TTCCTGCTGC GCCAGGCCTG GTGGCACCGC GCCACCACCG GTGTGCCGGG CGTGTCGCGC
CATCACGAGC AGATGGTCGA GTTCGCGGCC CGGCAGTGGC TCGACACGGT GTCGCCGTCG
AACGCGGTGC TGAGCAATCC GGCGGTGCTG CAGCGCACCT TCGACGAGCG GGGCGCCAAC
CTGGTCCGCG GCGCCCTGCA CGCTGCCGGC GATGCATGGC GCGACATGAC CGACCAGCCG
CCGATGGGTG CCGAGCAGTA CAAGCTGGGC GTCGACGTGG CCGCCACGCC CGGCCAGGTG
GTGCTGCGCA ACCGCCTGAT GGAGCTGATC CAGTACGCGC CCACCACGGC CCGCGTGCAC
CCCGAGCCGA TCCTGATCGT GCCGGCCTGG ATCATGAAGT ACTACGTGCT CGACCTGGAA
CCGCACAACT CGATGGTGCG TTTCCTGGTC GAGCACGGCT ACACCGTGTT CACCCTCTCC
TGGAAGAACC CGCAGGCCGA GGACCGCGAT CTCGGCCTCG ACGACTACTA CCGCCTGGGC
GTGCGCGCCG CGCTCGACGA GATCGCCGCG CGGCTGCCGG CACGGCCGGT GCACGCGGTC
GGTTATTGCC TGGGCGGCAC GCTGCTGTCG ATGGCCGCGG CGGCGCTCGG ACGCGAGAAA
TCGAAGGCCC TCAAGAGCAT CACGCTGCTG GCGGCGCAGA CCGATTTCAC CGATCCCGGC
GAGCTGTCGC TGTTCATCGA CGAAAGCCAG GTGGCCTGGC TCGAGAACCA GATGGCCCGG
CGCGGCTACC TCGAAAAAGG CCAGATGAAG GGCGCTTTCC AGATGCTGCG CTCGCGCGAC
CTGGTTTGGT CGTACCGGCT CGCCACCTAC CTGCTCGGCG AGCGCGCACC GGTCAGCGCG
CTGATGGCCT GGAACGCCGA CAGCACCCGC CTGCCGTGGC GCATGCACAG CGAATACCTG
CGTGCGCTCT ACCTCGACAA CGCGCTGGCG CACGGCGAGT TCCACCTCGA GGGCACGCCG
ATCAACCTGT CGGACATCCG GGTGCCGATC TTCACCGTCG GCACGGTGCA GGACCACGTC
GCGCCGTGGC GTTCGGTGTT CAAGCTGCAC CAGCTCACCA ACGCCGAGCA GACCTTCGTG
CTGACCGCCG GCGGCCACAA CGTCGGCATC GTCAACCCGC CGGGCCAGGC CCGGTCGAGC
TACCGGCTGT GCCGCTGGCA ACACGAAGAC CGGCTGCTGA CACCCGACGA ATGGCTGGCC
GCCAACGAGC CCGTCAAGGG TTCATGGTGG ACGCCGTGGA GCCAGTGGCT GGGCCGCCAC
TCGTCGACGC CGGAGGCGCC GCCGCCGCTC GCACCCTCGC TCGGAGCGGC GCCGGGGCTT
TACGTGTTCG ACAAGTGA
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| Protein sequence | MGDLLTQDLT AVSAGRAGAR EPGGSPWLGR RSPPSDSFVR YQAVERALQS MLPAQASSSV
APATSLGAFN DWALHLMTSP AKQWELMQLA AEQASQWWCA VAASPASMGR GPWCIEPLPQ
DRRFDDPAWR MPPFALIAQL FLLRQAWWHR ATTGVPGVSR HHEQMVEFAA RQWLDTVSPS
NAVLSNPAVL QRTFDERGAN LVRGALHAAG DAWRDMTDQP PMGAEQYKLG VDVAATPGQV
VLRNRLMELI QYAPTTARVH PEPILIVPAW IMKYYVLDLE PHNSMVRFLV EHGYTVFTLS
WKNPQAEDRD LGLDDYYRLG VRAALDEIAA RLPARPVHAV GYCLGGTLLS MAAAALGREK
SKALKSITLL AAQTDFTDPG ELSLFIDESQ VAWLENQMAR RGYLEKGQMK GAFQMLRSRD
LVWSYRLATY LLGERAPVSA LMAWNADSTR LPWRMHSEYL RALYLDNALA HGEFHLEGTP
INLSDIRVPI FTVGTVQDHV APWRSVFKLH QLTNAEQTFV LTAGGHNVGI VNPPGQARSS
YRLCRWQHED RLLTPDEWLA ANEPVKGSWW TPWSQWLGRH SSTPEAPPPL APSLGAAPGL
YVFDK
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