| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3209 |
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| Symbol | |
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| ID | 6161610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3553636 |
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| End bp | 3554286 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665983 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001792232 |
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| Protein GI | 171059883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACT TCTCCCTCTG GGACATCTTT CGCAACCTGC TGCTGGCCGC GCGCTGGACG
GTGCTGCTGT CGCTGATCGC CTTCATCGGC GGCAGCGTGG TCGGGCTGGC GCTGCTGCTG
TCGCGGCTGG CGCAGTGGCC CGGCGCGCAG CGCGCGGTGG CCGTCTACGT GCAGGTCTTT
CAGGGCACGC CGCTGCTGAT GCAGCTGTTC CTGGCGTACT TCGGGCTGGC GCTGTTCGGC
ATCAACGTGT CGGCCTGGGT GGCGGCCGGG CTGGCGCTGA CCTTCTACGC CAGCGCCTAC
CTGACCGAGA TCTGGCGCGG CTGCGTGATG GCGATCCCGA AAGGCCAGTG GGAGGCGGCC
GACAGCCTGG CGCTGTCGTT CGGCGAAAAG ATGCGCCACG TGATCGGCCC GCAGGCGCTG
CGCATCGCGG TGCCGCCGAC GGTCGGTTTC CTGGTGCAGG TGATCAAGGG CACGGCGCTG
GCGTCGGTGA TCGGCTTCAT CGAGCTGACC AAGGCCGGCA CCATGATCAC CAACGCCACC
TTCCGCCCGT TCACGGTCTA CGCCTGCGTG GCGGTGATGT ATTTCGTGCT GTGCTGGCCG
GTGTCGGCCT ATGCCCGCAA GCTGGAGAGG AGTTTCAAGC GTGAACGCTG A
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| Protein sequence | MVDFSLWDIF RNLLLAARWT VLLSLIAFIG GSVVGLALLL SRLAQWPGAQ RAVAVYVQVF
QGTPLLMQLF LAYFGLALFG INVSAWVAAG LALTFYASAY LTEIWRGCVM AIPKGQWEAA
DSLALSFGEK MRHVIGPQAL RIAVPPTVGF LVQVIKGTAL ASVIGFIELT KAGTMITNAT
FRPFTVYACV AVMYFVLCWP VSAYARKLER SFKRER
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