| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3204 |
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| Symbol | |
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| ID | 6162329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3548527 |
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| End bp | 3549480 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665978 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001792227 |
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| Protein GI | 171059878 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAAA TCCTGGATCA CCGCCCGGAC TGCCCGGCGC CCCATGTCGA CCCCGACGAC
CACAGCCCGG CCGCCCGCGC CGAACTGGGC CGGGTGATGC GCGAACAACT GGCCGCCTTC
GCCGAGGGCC TGGCGCAAGG CACGCGCCGC CTGCACCGCC CGGCGCCGGC CGGGGTGGCG
CGCGGCGAGG GCCATTTCCA CCTTGCGCCC GAGCTGTTCC TGCAGGTCAG CGGCTGGACG
CGTTTCGGCC TGCCGCACGG CGAAGTCACC GTCGGCCCCG GCGAGGCCTT GCTGATGCCC
GCGCGCCTGC TGCACCACGA GGCGGTGGGC GTGGCGGCCG ATGGCGAGCC GTTCCGCAAC
ATCGTGGTCT ACGCCGACGG CCGGGTGCTG ACCTGCCACC TGGCGCACGA ACACGCGGCC
GGCGAGCCCG GCATCCTCTT CCTCGAAGCC CGCCAGCATC CGCAGGCCGG GCGCGCCCAG
GCCTGGCTGG CCGATGCGGC TGCGGTTGGC GACGAGCCCC ACGCGGCCGA AGAACAGCAG
GCCCGCGCTC TGGTGATGGC CGTGCTGGCC GGCGTGCGCC GCGCACTCGA TGACGTGACG
AGCGCCCCGA GCGCGGGCGA GCCACCGCTG ATCGCGCGGT TGCGGGTGCT GATCCAGAAC
CAGCTCGGCG ACCATGAACT CAGCGTGCGC CGGCTGGCCG AACAATCCGG CTGCAGCGCC
GATCACCTGT CGCATCGCTT TCGCCTGACT GCGGGTGAGC ATCTGGTGGC CTACCTCAAT
CGACAGCGCA TGGAGCGTGC GGCACACCTG CTGGCGGACA CCGATCTGGC GGTCAAGGAG
GTGGCGTGGG CTTGCGGGTT TGCGAGTGCG AGCTACTTCA TCCGCACCTT CCGTGCTCAT
CACGGTGAGA CGCCGGTGGC CTGGCGGGGC ACGCATCAGA GGCAGGTGGC TTGA
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| Protein sequence | MLKILDHRPD CPAPHVDPDD HSPAARAELG RVMREQLAAF AEGLAQGTRR LHRPAPAGVA
RGEGHFHLAP ELFLQVSGWT RFGLPHGEVT VGPGEALLMP ARLLHHEAVG VAADGEPFRN
IVVYADGRVL TCHLAHEHAA GEPGILFLEA RQHPQAGRAQ AWLADAAAVG DEPHAAEEQQ
ARALVMAVLA GVRRALDDVT SAPSAGEPPL IARLRVLIQN QLGDHELSVR RLAEQSGCSA
DHLSHRFRLT AGEHLVAYLN RQRMERAAHL LADTDLAVKE VAWACGFASA SYFIRTFRAH
HGETPVAWRG THQRQVA
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