| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3199 |
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| Symbol | |
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| ID | 6162451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3540929 |
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| End bp | 3542452 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665973 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792222 |
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| Protein GI | 171059873 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.28101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAACGC TCCTCGAGAT GCGCGACATC CGCAAGACCT TTCACGGGGT GGTTGCGCTC
AACAAGGTCA ACCTGCGCGT GCGCGCCGGC GAGATCCACG CCATCGTCGG CGAGAACGGC
GCCGGCAAGT CGACGCTGAT GAAGGTGCTG TCGGGCGTGT ACCCGCACGG CGACTACAGC
GGCGAGATCC GTTACCAGGG CGCCGAGCGG CGCTTTCGTG GCATCCACGA CAGCGAGCAG
GTCGGCGTGA TCATCATCCA CCAGGAGCTG GCGCTGGTGC CCCTGCTGTC GATCGCCGAG
AACATCTTCC TCGGCAACGA GACCGCCAGG AATGGCGTGA TCGACTGGAT GGCCGCGCAC
AGCCGCACCC AGGCGCTGCT GAAGAAGGTC GGCCTGAAAG AGTCGCCCGC CACGCTGATC
ACCGACATCG GCGTGGGCAA GCAGCAGCTG GTGGAGATTG CGAAGGCGCT GTCGAAGGAG
GTCAAGCTGC TGATCCTCGA CGAGCCCACC GCCAGCCTGA ACGAGAACGA CAGCCAGGCG
CTGCTCGACC TGCTGCTGGG CCTGAAGGCG CAGGGCATCA CCTGCATCCT GATCTCGCAC
AAGCTCAACG AGATCTCGCG CGTGGCCGAC TCGATCACCA TCCTGCGCGA TGGCAGCACG
GTCGAGACAC TCGACTGCAG CGCCGGCGCG GTGAGCGAGG ACCGCGTGAT CCGCGGCATG
GTCGGGCGCG AGATGGCCGA CCGTTATCCC AAGCGCACGC CCCACATCGG CGAGACCGTG
TTCGAGGTGC GCGACTGGCA CGTCCATCAC CCGCTGCACG CCGAGCGCGA GGTCATCAAG
GGCGTCAACC TGCAGGTGCG GCGCGGCGAG ATCGTCGGCA TCGCCGGCCT GATGGGCGCG
GGCCGCACGG AGCTGGCGAT GAGCGTGTTC GGCCGCTCGT GGGGCCGGCG CATCAGCGGC
CAGGTGCTCA AGAACGGCCA GGTCATCGAC GTCGGTACGG TCGGCAAGGC GGTGGCCCAC
GGCCTGGCCT ACGTGACCGA AGACCGCAAG GGCAACGGCC TGGTGCTCAG CGAGGACATC
CAGTTCAACA CCTCGCTGGC CAGCCTGGAG CGGGTCTCGA ACGGCGTGGT GATCGATGCG
GGGCGCGAGT ATTCGGTGGC CCAGCAATAC CGCGACAAGC TGCGCATCCG CTGTGCCGGC
GTCGGCCAGA AGACCGTGCA CCTGTCGGGT GGCAACCAGC AGAAGGTGGT GCTGAGCAAA
TGGCTCTTCA CCGAGCCCGA GGTGCTGATC CTCGACGAGC CCACACGGGG CATCGACGTC
GGTGCCAAGT ACGAGATCTA CACCATCATT GCCCAGCTCG CCGCTGAAGG TAAGTGCGTG
ATCGTGATCT CGTCGGAGAT GCCCGAGCTG CTCGGCATGT CCGACCGCAT CTACGTGATG
AACGAAGGCC GCTTCGTGGC CGAGATGCCG GCCTCTGAAG CGTCGCAGGA AAAGATCATG
CGCGCGATCG TGAAAGTGAA CTGA
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| Protein sequence | METLLEMRDI RKTFHGVVAL NKVNLRVRAG EIHAIVGENG AGKSTLMKVL SGVYPHGDYS
GEIRYQGAER RFRGIHDSEQ VGVIIIHQEL ALVPLLSIAE NIFLGNETAR NGVIDWMAAH
SRTQALLKKV GLKESPATLI TDIGVGKQQL VEIAKALSKE VKLLILDEPT ASLNENDSQA
LLDLLLGLKA QGITCILISH KLNEISRVAD SITILRDGST VETLDCSAGA VSEDRVIRGM
VGREMADRYP KRTPHIGETV FEVRDWHVHH PLHAEREVIK GVNLQVRRGE IVGIAGLMGA
GRTELAMSVF GRSWGRRISG QVLKNGQVID VGTVGKAVAH GLAYVTEDRK GNGLVLSEDI
QFNTSLASLE RVSNGVVIDA GREYSVAQQY RDKLRIRCAG VGQKTVHLSG GNQQKVVLSK
WLFTEPEVLI LDEPTRGIDV GAKYEIYTII AQLAAEGKCV IVISSEMPEL LGMSDRIYVM
NEGRFVAEMP ASEASQEKIM RAIVKVN
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