Gene Lcho_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3196 
Symbol 
ID6162448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3538004 
End bp3538675 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID641665970 
ProductN-(5'phosphoribosyl)anthranilate isomerase (PRAI) 
Protein accessionYP_001792219 
Protein GI171059870 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0254267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGC GCCGCCCTTT CGTCAAGATC TGCTGCATCT CCAGCCCCGA AGAAGCGCAG 
CTCGCGATTG CTGCGGGCGC CTCGGCGCTG GGTCTGGTCT CGGCCATGCC CAGCGGGCCG 
GGCGTGATCG ACGAGGACCT GATCGCCCAG ATCGCCGCGG TGGTGCCGCC GGGCATCGAC 
ACCTTTCTGC TGACGTCGCG GCAGGACGCC ACCTCGATCA TCGAACAGCA CCGGCGCTGC 
CTCACGACCA CGCTGCAGCT GGTCGACGCG CTGCCCGAGG CCGAGCTGCG CCGGCTGCGC 
CGCAAGCTGC CGGGCGTGCA GCTGGTGCAG GTGATCCACG TCATCGGCGA GCAGTCGGTG 
GCGCAGGCGC TGGCAGTGGC GCCGCTGGTC GATGCGCTGC TGCTCGACTC GGGCAACCCG 
GCGCTGGCGG TCAAGCAGCT CGGTGGCACG GGGCGCACGC ACGACTGGGC GCTGAGTCGG 
CGCATCGTCG CGCACAGCGG CGTGCCGGTG TTCCTGGCCG GCGGCCTGCG CGCCCACAAC 
GTCGCCGAAG CCATCGCCGA GGTGCAGCCG CACGGCCTCG ACCTGTGCAG CAGCGTGCGC 
AGCGACGGCC GGCTCGATGC GGTCAAGCTG CAAGCGTTCT TCGACGCCGT CGCGGCCACC 
GCACCGATCT GA
 
Protein sequence
MRLRRPFVKI CCISSPEEAQ LAIAAGASAL GLVSAMPSGP GVIDEDLIAQ IAAVVPPGID 
TFLLTSRQDA TSIIEQHRRC LTTTLQLVDA LPEAELRRLR RKLPGVQLVQ VIHVIGEQSV 
AQALAVAPLV DALLLDSGNP ALAVKQLGGT GRTHDWALSR RIVAHSGVPV FLAGGLRAHN 
VAEAIAEVQP HGLDLCSSVR SDGRLDAVKL QAFFDAVAAT API