| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3181 |
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| Symbol | |
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| ID | 6162964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3516743 |
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| End bp | 3517471 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665956 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001792205 |
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| Protein GI | 171059856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000519334 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGAC AACTCGATGG CAAGGTGGCG GTCGTCACCG GGGCCGCTTC GGGCATCGGA
CTGGCGAGCA CCGAGGCCCT GCTGGCCTCG GGTGCGCGCG TGGTGATGGT CGACCGCGAC
GAGGCGGCGA TGGCGGCCCT GCGCGGCCGG CATGGCGACG CGGTGATGCC GCTGCGCATC
AACCTGCTCG ACCCGAAGGA CTGCGCGACG CTGGTGCCGA GGGCGCTCGA GCTGGCCGGC
CAGATCGACA TCCTGCATGC CAATGCCGGC GCGTATGTCG GCGGCGATCT GGTCGACAAC
GACAACGACG CGATCGACCG GATGCTGAAC CTGAACGTCA ACGTCGTGAT GAAGAACGTG
CACGACGTGC TGCCGCACAT GATCGCGCGG CGCACCGGCG ACATCATCGT CACCAGCTCC
CTGGCGGCCC ATTTCCCGAC ACCGTGGGAG CCGGTCTACG CGTCGTCCAA ATGGGCGATC
AACTGCTTCG TCCAGACGGT GCGGCGCCAG GTGTTCAAGC ACGGCATCCG CGTCGGCTCG
ATCTCGCCCG GCCCGGTCAT CACCGCGCTG CTCGCCGACT GGCCGCCCGA GAAGCTGCAG
GAAGCCCGGG AATCGGGCAG CCTGCTCGAA GCCGGCGAAG TGGCCGAGGT GGTGACCTTC
ATGCTGACCC GGCCGCGCGG CATGACCATC CGCGACGTGG TGATGATGCC CACCCACTTC
GATCTCTGA
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| Protein sequence | MARQLDGKVA VVTGAASGIG LASTEALLAS GARVVMVDRD EAAMAALRGR HGDAVMPLRI
NLLDPKDCAT LVPRALELAG QIDILHANAG AYVGGDLVDN DNDAIDRMLN LNVNVVMKNV
HDVLPHMIAR RTGDIIVTSS LAAHFPTPWE PVYASSKWAI NCFVQTVRRQ VFKHGIRVGS
ISPGPVITAL LADWPPEKLQ EARESGSLLE AGEVAEVVTF MLTRPRGMTI RDVVMMPTHF
DL
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