Gene Lcho_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3171 
Symbol 
ID6161653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3502655 
End bp3502990 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content65% 
IMG OID641665946 
ProductRelE-like cytotoxic translational repressor of toxin-antitoxin stability system 
Protein accessionYP_001792195 
Protein GI171059846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00104102 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGACCG TTGCCGAGCT GCCCGAATAC CAGCGCCGGG CCGCCAAGCT GCTGCCTGAC 
GAGGATCGCC GGGCCGTGGT CGACTACCTG GCCGCACATC CCCGCGCAGG CGACCTGATC
GAAGGCACCG GCGGCGTGCG CAAGCTGCGA TGGGGGCGCG ACGGCCGCGG CAAAAGCGGT
GGCGTGCGGG TCATCTACTA CGTGCACAGC GAGGCCATGC CGTTGTATCT GCTGACGATG
TTCGCCAAGA ACGAGCGGGC GAACATCAGC AAGGCAGAAC GCAACGAGCT GGCCGGCCTG
GTCGATGTGC TGGTGCAAAT CTGGTTCGAA AGGTGA
 
Protein sequence
MLTVAELPEY QRRAAKLLPD EDRRAVVDYL AAHPRAGDLI EGTGGVRKLR WGRDGRGKSG 
GVRVIYYVHS EAMPLYLLTM FAKNERANIS KAERNELAGL VDVLVQIWFE R