Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3171 |
Symbol | |
ID | 6161653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3502655 |
End bp | 3502990 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665946 |
Product | RelE-like cytotoxic translational repressor of toxin-antitoxin stability system |
Protein accession | YP_001792195 |
Protein GI | 171059846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00104102 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGACCG TTGCCGAGCT GCCCGAATAC CAGCGCCGGG CCGCCAAGCT GCTGCCTGAC GAGGATCGCC GGGCCGTGGT CGACTACCTG GCCGCACATC CCCGCGCAGG CGACCTGATC GAAGGCACCG GCGGCGTGCG CAAGCTGCGA TGGGGGCGCG ACGGCCGCGG CAAAAGCGGT GGCGTGCGGG TCATCTACTA CGTGCACAGC GAGGCCATGC CGTTGTATCT GCTGACGATG TTCGCCAAGA ACGAGCGGGC GAACATCAGC AAGGCAGAAC GCAACGAGCT GGCCGGCCTG GTCGATGTGC TGGTGCAAAT CTGGTTCGAA AGGTGA
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Protein sequence | MLTVAELPEY QRRAAKLLPD EDRRAVVDYL AAHPRAGDLI EGTGGVRKLR WGRDGRGKSG GVRVIYYVHS EAMPLYLLTM FAKNERANIS KAERNELAGL VDVLVQIWFE R
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