Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3165 |
Symbol | |
ID | 6161762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3499024 |
End bp | 3499323 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641665941 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001792190 |
Protein GI | 171059841 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.011268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA GAGAACGAAG GACATTCAAC GCGGAATTCA AGCTGCAAGT GGTGCAGATG ATTCGCGAGC AGGGCTTGAG CGTGGGCGAC GTCTGCCGCG ACATGAAGCT CGGCGAGACG GCCGTGCGGC GATGGCTGGC GCAAGCCGAT GAAGAGGCTG CAGGCCGCCC CGGCATTGGC AAACCGCTCA CCGCCGAGCA GCAACGCATC CGCCAGCTTG AGGCCGAGAA CAAGCAACTG CGCGGCGACG TCGACATCTT AAAAAAAGCA TCGGCCTTCT TTGCCCGCGA GCTTCGATGA
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Protein sequence | MSKRERRTFN AEFKLQVVQM IREQGLSVGD VCRDMKLGET AVRRWLAQAD EEAAGRPGIG KPLTAEQQRI RQLEAENKQL RGDVDILKKA SAFFARELR
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