Gene Lcho_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3157 
Symbol 
ID6162734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3483839 
End bp3484423 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID641665932 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001792182 
Protein GI171059833 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC CCGACCCCGT CTCGCTGATC GGGCGGCACG TGCAGCTGGT GCCGCTGGCA 
CACGCGCATG CGCACGGCCT GATCGAAGCC GCACGCGAGC TGCAGCCGCT CTGGTACACC 
GCCGTGCCCG ACCCCGAGGC GATGGCCGAG GAGATCGAGC GGCGCCTGGG CTTGCAGGCC 
ACCGGTTCGA TGCTGCCGTT CACGCTGCTC GACGCGGCCG GCGTGCCGGT CGGCATGACG 
AGCTACATGC ACATCGACGC CCGGCACCGC CGGCTCGAGA TCGGCTCGAC CTGGCTGACG 
CCGCGGGTGC AGCGCAGCGG CCTGAACACC GAGTCGAAGT GGCTGCTGCT GCGCCATGCG 
TTCGAGCAGC TCGACTGCAT CGCCGTCGAG CTGCGCACGC ACCGCCTGAA CCTGCAGAGC 
CGGCGCGCCA TCGAGCGGCT GGGCGCGCAG CTCGACGGCA TCCTGCGCCA CCACCAGCGC 
ACCGCCGACG GCAACCTGCG CGACACCTGC GTCTACAGCA TCACCGCGCC CGAATGGCCG 
ACGGTGAGCA CCCACTTGCG CTGGCTGCTC GAACGGCGGC GCTGA
 
Protein sequence
MSWPDPVSLI GRHVQLVPLA HAHAHGLIEA ARELQPLWYT AVPDPEAMAE EIERRLGLQA 
TGSMLPFTLL DAAGVPVGMT SYMHIDARHR RLEIGSTWLT PRVQRSGLNT ESKWLLLRHA 
FEQLDCIAVE LRTHRLNLQS RRAIERLGAQ LDGILRHHQR TADGNLRDTC VYSITAPEWP 
TVSTHLRWLL ERRR