Gene Lcho_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3154 
Symbol 
ID6162731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3481989 
End bp3482585 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content71% 
IMG OID641665929 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001792179 
Protein GI171059830 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA TGTCGTCCGC AGCCGAATCG CCAGAAGGGC ACACCGCCGA GGCCCGCGCC 
GTCGACACGC CCCTGCCCGG CCTGCAGCTG CGCCCGGCCC AGCTGCACGA TGCGGCGGCG 
ATCGCCGCCA TCCTGAACCA CTACATCGTC TTCACCACCG CCACCTTCAT GACCGAGCCG 
GTGTCGGTCG ACAGCCGACG CGCCTTCATC GTCGAGCGCA AGCCCGAGCA TCCGATCTGG 
GTGGCCGAGC GCGACGGCGT GGCGATCGGC TGGGCCGCGC TGGCGCAGCA CCAGCCGCGC 
AGCGCCTACG GGCACACGCT GGAGAACTCG ATCTACCTGC ACCCGGGCCA CGTCGGCCGC 
GGCATCGGCA CGCTGCTGAT GAGTCAGCTG GTGGCCGATG CGCAGCGGCG GGGTTTTCAC 
AGCCTGATCG CCGGGGCGTG CAGCGAGCAG GCCGGCAGCC TCGCGCTGCA CGAGCGCATG 
GGCTACCGGC GCTGCGCGCA CTTCCACGAG GTGGCGCGCA AGTTCGATCG CTGGCTGGAT 
GTGGTCTATC TCGAACGGCT GCTGCAGCCC GCCAGCCACG ATCCGGCGCC GCGCTGA
 
Protein sequence
MAGMSSAAES PEGHTAEARA VDTPLPGLQL RPAQLHDAAA IAAILNHYIV FTTATFMTEP 
VSVDSRRAFI VERKPEHPIW VAERDGVAIG WAALAQHQPR SAYGHTLENS IYLHPGHVGR 
GIGTLLMSQL VADAQRRGFH SLIAGACSEQ AGSLALHERM GYRRCAHFHE VARKFDRWLD 
VVYLERLLQP ASHDPAPR