Gene Lcho_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3140 
Symbol 
ID6162899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3467947 
End bp3468540 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID641665915 
Productaspartate/glutamate/uridylate kinase 
Protein accessionYP_001792165 
Protein GI171059816 
COG category[R] General function prediction only 
COG ID[COG2054] Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTCG TCAAACTCGG AGGCAGCCTG TGCACCGATG CGCTGCTGCC CGACTGGCTG 
GCGCTGCTGG GCCAGCTCGG CGGTGGCCGC GTGGCACTGG TGTGCGGCGG CGGCACGCTG 
GCCGACGAGG TGCGCAGCCT GCAGGGCCGC TGGCAGGTGG GCGACCTGAG CGCACACAAC 
ATGGCGGTGC TGGCGATGGT GCAGAACGCC TACCTGCTGC ACGGCCTGAA CCCGGCCCTG 
CAGCCGGTCT GCCGCGAGGT CGACGTGCTG CCCACGCTGC GCCGCGGCGG CGTGGCGCTG 
TGGATGCCGC TGGAGCTGCT GCGCGACCAG TGCGACGCCA CCACCAACTG GGACGTCACC 
TCCGACAGCA TCGCGCTGGG CCTGGCGCAG CGCCTGAACG CCGAGCGGCT GGTGGTGATC 
AAGAGCTGCC AGGTCGACGA GCAGTTGAGC CTCGAAGCCC TGGTGGCGCA CGAGGTGCTC 
GACCGCAACT TCGCCGCCCA GGCGCGCCAG TCCGGCATGC CGATCGACCT GCTGAGCCGC 
GAACAGGGTG GCGAGATGAA GTCGCTGCTG CTGCAAGGCT GCCGGGCGCA TTGA
 
Protein sequence
MWVVKLGGSL CTDALLPDWL ALLGQLGGGR VALVCGGGTL ADEVRSLQGR WQVGDLSAHN 
MAVLAMVQNA YLLHGLNPAL QPVCREVDVL PTLRRGGVAL WMPLELLRDQ CDATTNWDVT 
SDSIALGLAQ RLNAERLVVI KSCQVDEQLS LEALVAHEVL DRNFAAQARQ SGMPIDLLSR 
EQGGEMKSLL LQGCRAH