| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3135 |
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| Symbol | |
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| ID | 6161068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3461692 |
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| End bp | 3463377 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665910 |
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| Product | formylmethanofuran dehydrogenase subunit A |
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| Protein accession | YP_001792160 |
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| Protein GI | 171059811 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1229] Formylmethanofuran dehydrogenase subunit A |
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| TIGRFAM ID | [TIGR03121] formylmethanofuran dehydrogenase subunit A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TCCGACTGCG CGGCGGCCGG CTGCACGACC CGGTGCACGG CATTGACGGC
GAGTTGCGCG ACCTCGCCTG GCGCGATGGC CGCATCGTCG CGCTGCAAGC CGGCGAGCCG
GTCGACGAAG ACATCGACGC CAGCGGCTGC ACCGTGATGG CCGGCGGCAT CGACCTGCAC
ACCCACATCG GCGGCGGCAA GGTCAACCTG TCGCGCCTGC TGCTGCCCGA GGACCACCGC
GTCGATGCCA ACCCCTGCGG GCGGCCCGGC AATGCGCTCG AATTCGACTC GTGTGGCCAC
GTCACGCCCG GCACGCTGGC CACCGGCTAC CGCTACGTGC AGATGGGCTA CACGGCAGCG
TTCGAGCCGG CGATGGTGGC GGCCAACGCG CGCCACGCCC ACATGGAGAT GGGCGACACC
CCCATCCTCG ACCACGGCGC CTACGTGATG CTCGGCAACG ACGAGCTGCT GCTGCAGATG
CTCGCCGAAG GCGCCCACCC CGACCAGATC CGCGACCTGA TCGGCTGGAC GCTGCACGCC
ACCAAGGCGA TGGGCGTGAA GGTGGTCAAC CCCGGCGGCA TCTCGGCCTT CAAGTTCAAC
CAGCGCAAGC TCGATGTCGA CGAGGCGCAC ACCCACTGGC AGGTGACGCC GCGCCAGGTG
GTGCATGCGC TGGCGCAGGG GCTGCAGCAG CTGGGCGTGC CGCACCCGCT GCACATCCAC
GGCAGCAACC TGGGCGTGGC CGGCAACATC GCCTCGACGC TCGAAACCAT CGCCGCGCTC
GAAGGCCTGC CGGCGCACCT TACGCACGTG CAGTTCCACG CCTACGGCAC CGAAGGGCCG
AAGAAGTTTT CATCCGCCGC GCTGCAGCTG GCCGAGGCGG TCAACGCGCA TCCGAACATC
AGCATCGACG TCGGCCAGAT CATCTTCGGC CAGACCGTCA CCGCCAGCGG CGACACCATG
CGCCAGCACG CCAATTCAGG CATCGCCAGC CCGCGCAAGT GGATCGGCTC CGACATCGAA
TGCGAAGCCG GCTGCGGCGT GGTGCCGTTC CGCTACCGCG AGAGCAGCTA CGTCAACGCA
CTGCAATGGG CGATCGGGCT GGAGCTGTTC CTGCTGGTGC GCAACCCCTG GCAGGTGGTG
CTGACCACCG ACCACCCCAA CGGCGGGCCG TTCACGAGTT ATCCGCACCT GATCCGCCTG
CTGATGGACC GCAGCTTCCG CGAAGAACAG CTCGCCCGCC TGCACCCCGA CGTGGCCGCC
AACAGCGCGC TGAAAGCCAT CACCCGCGAG CTGACGCTGC AGGAGATCGC GATCCTGACC
CGCGCCGCGC CGGCCCGCTT GCTGGGCCTG GCCGACCGCG GCCAGCTCGG CGTGGGTGCG
GCGGCCGACA TCGCCGTCTA CCGCGACGAC CCCGACCGTG AGCGCATGTT CAGCACGCCC
GAGTGGGTGT TCAAGGACGG CACGCTGGTG TCGCGCGCCG GGCTCATCAC GGCGGTGCCG
ACCGGCGGCA CGCACTTTGT CGAACCGGCC TACGACACCA GCTTCCAGCA CACGTTGCGC
AAGCGGCTGG CGCGTTACGG CTCGGTCAAC ATCGACCACC TCGCGATCGA CCGCGACGAG
CTGTGCGAGT GCTGCCACGG CGGCCGGCTG CTGCCGACCG CGTGTTTCCA GGGAGCGTCG
GCATGA
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| Protein sequence | MTTIRLRGGR LHDPVHGIDG ELRDLAWRDG RIVALQAGEP VDEDIDASGC TVMAGGIDLH
THIGGGKVNL SRLLLPEDHR VDANPCGRPG NALEFDSCGH VTPGTLATGY RYVQMGYTAA
FEPAMVAANA RHAHMEMGDT PILDHGAYVM LGNDELLLQM LAEGAHPDQI RDLIGWTLHA
TKAMGVKVVN PGGISAFKFN QRKLDVDEAH THWQVTPRQV VHALAQGLQQ LGVPHPLHIH
GSNLGVAGNI ASTLETIAAL EGLPAHLTHV QFHAYGTEGP KKFSSAALQL AEAVNAHPNI
SIDVGQIIFG QTVTASGDTM RQHANSGIAS PRKWIGSDIE CEAGCGVVPF RYRESSYVNA
LQWAIGLELF LLVRNPWQVV LTTDHPNGGP FTSYPHLIRL LMDRSFREEQ LARLHPDVAA
NSALKAITRE LTLQEIAILT RAAPARLLGL ADRGQLGVGA AADIAVYRDD PDRERMFSTP
EWVFKDGTLV SRAGLITAVP TGGTHFVEPA YDTSFQHTLR KRLARYGSVN IDHLAIDRDE
LCECCHGGRL LPTACFQGAS A
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