Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3123 |
Symbol | |
ID | 6164064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3451714 |
End bp | 3452796 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641665898 |
Product | transposase IS4 family protein |
Protein accession | YP_001792148 |
Protein GI | 171059799 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGC CGCGCATCAA GCCCTCGAGC TTCTTCCCTG AGGAGGAAGC GGTGGACGAC CTGTTCCTGG CGCGCCAGCG CAAGGCCAAG CTCGAGGGCT ACGTGCAGAC GCTGGCGGCG ATCGACGCGC TGGTGGACTT CACGGCGATG GCCGCGGCGG TCGATGCGGC GTGTCCGCGC GCCGACCGCA AGAAGGGTGG CCGCCCGCCG TACCCGAGCG AGGTGCTGGT GCGCATGGTC TTCCTGCAAG GGCTCTACAA CCTGTCGGAC GAGCAGTGCG AGCACCAGGT GCTCGACCGG CTGAGCTTCC AGCGCTTCTG CCGGCTCGAC GGCGCCTTGA ACATCCCCGA CGCCCGCACG CTGTGGAGCT TTCGGCAGCG CCTGGCCCAG GGCGGGCTGG GCGGACGGGC GATCTTCGAG ACGCTGAGTC AGCAGTTGCA GCAGCACGGG TTCATCCCGC GCGGCGGGCA GATCGTCGAC GCCAGCATCG TGGCCGCACC CATCACCCAG GCCAACACCG CCGAGCGCGA GGCGCTCAAC AAGGGCGAGA CGCCCGAAGG CTGGAGCAAG AAGCGCATGG CGCACACCGA TGGCGACGCA CGCTGGACGC AGAAGCACGG CAAGAGCTAC TACGGCTACA AGCTGCACGC CAACGCGGAT GCGCGCTACA AGCTCATCCG CACCCTGAAG ATCACGGCGG CCAATGCCGA CGACGGCCAG CAGCTCCCCC ACGTGCTGCA GTCGGCCAAC ACGCGCGATC GCCTGCTGGC CGACCGCGGC TACGACAGCC AGGCCAACCG GCAGGTGCTG GCGCAGCAGG GCCTGGTCGA CGGCATCGCG CGGCGGGCCA GGCCGGGGCA GACCGCCAAG ACCCGACTGA AGCAGCGCAA TCGCACGATC AACCGGACCC GCTCGCGCGT CGAGCACGTC TTCGCCAGCC TGGCCCAGCA GGGCGGCAAG TGCGTGCGGG CGATGACGCT GGCGCGCAAT GCGCTGGCCA TCACGCTGCA GTGCGCGGCC TACAACGCGC GCAGGCTGGT GTGGCTGGTC AAGAGCACGG GTGCGTCTGC GAGGCCGGTG TGA
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Protein sequence | MITPRIKPSS FFPEEEAVDD LFLARQRKAK LEGYVQTLAA IDALVDFTAM AAAVDAACPR ADRKKGGRPP YPSEVLVRMV FLQGLYNLSD EQCEHQVLDR LSFQRFCRLD GALNIPDART LWSFRQRLAQ GGLGGRAIFE TLSQQLQQHG FIPRGGQIVD ASIVAAPITQ ANTAEREALN KGETPEGWSK KRMAHTDGDA RWTQKHGKSY YGYKLHANAD ARYKLIRTLK ITAANADDGQ QLPHVLQSAN TRDRLLADRG YDSQANRQVL AQQGLVDGIA RRARPGQTAK TRLKQRNRTI NRTRSRVEHV FASLAQQGGK CVRAMTLARN ALAITLQCAA YNARRLVWLV KSTGASARPV
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