| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3116 |
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| Symbol | |
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| ID | 6164071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3447225 |
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| End bp | 3448088 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665891 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792141 |
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| Protein GI | 171059792 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5501] Predicted secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATG ACCCCGACCG TCGCCGCCTG CTTGTAGCGG CATGGGGCGG CAGCGCCGCG
CTGATCGGCG CCTGGCTGCC CGGTGGCAGC CACGCCGCGA TCGGCGGGCT GCCGAGCAAC
GTCGGCCACG CCGACAGCTC GCCGCAGTGG GAGCTGCTGC GCGGCAAGCT GTTCGGCGAG
CGGCCGATCG CCGCCGGCGC CGCCAGCCAG GTGCAGATCA TCGTGCCGCT GCGCGCGGCC
TACGGCGCCT CGGTGCCGGT CAAGATCGTC TCCAGGATCG CGCAGACACC CGAGCGCCAG
GTGCGCCGCA TGACGCTGCT GGTCGACAAG AACCCCTCGC CGATCGCCGC CACGCTGACG
CTCGGCACAG CGCTCGGCCA GGCCGATTTC GAGACCCGGC TGCGGGTCGA CGAATACAGC
CACGTGCGCG TGGTCAGCGA GCTGAGCGAC GGCACGCTGC ACATGGATTC GCGCTACGTC
AAGGTCTCGG GCGGCTGCAG CGCACCGCCC AACCGCGAGG CCCTGCACCT GATCGGCCGC
ACCACGATGC GCCTGCCCGC CGGCCTGCAC CCCGGCGCGC CCACGCCGGT CGAGCTGAGC
GTGGTGCACC CCAACGACAC CGGCTTCGAG CTCAACCAGG TCACGGTGAT GTTCATCCCG
CCGCACTTCG TGCGCAGCAT CCGCGTGCGG CTGGGCGAGG CGCTGCTGTT CGAGGCCGAC
ACCGATTTTT CGATCAGCGA GAACCCGAGC TGGCGCTTCA ACTTCGTGCC ACGCGCCGAT
CAGCACGCGC TGCTGACCGC AGAGGTCGAG GACACAAAAG AACAGCGCTT TCGCGGCACG
CTCGACCCGT GGGCGGCGGC GTGA
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| Protein sequence | MAHDPDRRRL LVAAWGGSAA LIGAWLPGGS HAAIGGLPSN VGHADSSPQW ELLRGKLFGE
RPIAAGAASQ VQIIVPLRAA YGASVPVKIV SRIAQTPERQ VRRMTLLVDK NPSPIAATLT
LGTALGQADF ETRLRVDEYS HVRVVSELSD GTLHMDSRYV KVSGGCSAPP NREALHLIGR
TTMRLPAGLH PGAPTPVELS VVHPNDTGFE LNQVTVMFIP PHFVRSIRVR LGEALLFEAD
TDFSISENPS WRFNFVPRAD QHALLTAEVE DTKEQRFRGT LDPWAAA
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