Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3114 |
Symbol | |
ID | 6164069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3445641 |
End bp | 3446177 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641665889 |
Product | MxaD protein |
Protein accession | YP_001792139 |
Protein GI | 171059790 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGAC GCCCCTTTCA TCGCCACCTC CTGATGCTGC TGGCGCTGCT GACCGTGCCG CTGGCCGGCC AGGCCCACGG CCCGACCCGC CAGAAGGTGA CCGAGAGCAT CACCATCGAC GCCCCCGCCG CCACCGTCTG GGCCCGCATC CAGGATTTCG ACGCGCTCAA GAACTGGCAC CCGGCGGTGG CCGAGAGCGC GGCCGACAAG GGCAACGAGG TCGGCTCGGT GCGGATCGTC AAGCTCAAGG GCGGCGGCGA GCTGGTCGAA TCGCTCGAAC GCCACGACGC CGCGCAGAGG CTCTACAGCT ACCGCGCCAA GAACGGCGGC GCGCTGCCGG TCACCAACTA CAGCTCGACG ATCCGCGTCA GCGAGGCCGC CGGCAAGGCC AGCGTCGAGT GGCGCGGCGC CTTCTACCGC GGCTACCCCA ACAACGACCC GCCGCCGGAC CAGAACGACG AGGCCGCGGT CAAGGCCGTC ACCGGCGTCT ACCAGAGCGG GCTGGCGAAC CTGAAATCGC TGGTCGAAGG CAAGTAG
|
Protein sequence | MTRRPFHRHL LMLLALLTVP LAGQAHGPTR QKVTESITID APAATVWARI QDFDALKNWH PAVAESAADK GNEVGSVRIV KLKGGGELVE SLERHDAAQR LYSYRAKNGG ALPVTNYSST IRVSEAAGKA SVEWRGAFYR GYPNNDPPPD QNDEAAVKAV TGVYQSGLAN LKSLVEGK
|
| |